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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48845.1
DDBJ      :             transposase, IS4 family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  19/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.55.3
:484 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   230->477 1b7eA PDBj 2e-06 13.1 %
:RPS:SCOP  230->477 1b7eA  c.55.3.4 * 5e-09 12.2 %
:HMM:SCOP  255->414 1musA_ c.55.3.4 * 1.1e-06 21.9 %
:RPS:PFM   199->407 PF01609 * Transposase_11 1e-07 30.3 %
:HMM:PFM   197->409 PF01609 * Transposase_11 1.3e-23 28.7 171/207  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48845.1 GT:GENE ABO48845.1 GT:PRODUCT transposase, IS4 family protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 309968..311422 GB:FROM 309968 GB:TO 311422 GB:DIRECTION + GB:PRODUCT transposase, IS4 family protein GB:NOTE PFAM: transposase, IS4 family protein KEGG: sec:SC089 transposase GB:PROTEIN_ID ABO48845.1 GB:DB_XREF GI:134050874 InterPro:IPR002559 LENGTH 484 SQ:AASEQ MMVSQFITTNQLETLTRQQRRDLERKYQKKLHSLQRLTSKSDLPISFDNTSVTAYGNFGILEAFKQAIDFKGMLKGVSLKRHHNCKYSDTGLLDTIIDALSLGLLRFSHMNALQTDPGYQKIKEVTQVPDESTLRNFLSLICEQEALNQLPLVNQEMLSLKAKSDQPREVWLDINDSVLTVFGKQEGSKVGYNPRYHGRPSYKVKVAFISGTCELVNAGLYSGNVASNGQFMEFLKETLEILAAQNILVKGIRIDKGFFDEDNFAYLEEQGIEYICKAKLTSNMRKVIKYLDDQNQWQSLSNHYAAAEITIPLPKWSKARRFVFIRETQEPKACGDQLNFDLKTFDYQVIITSSDEHNPEEVWHEYNKRCNIENKIDELKVGLGFEKMSQAEMDRNKAFMWLKVLSYNLLNWFRLALLDGKDSRAEVPTIRRKILNVPGNIVGNNRYRHIKLAPNPWLQKALKNAKEKLQEFLCIQAWVAVSSG GT:EXON 1|1-484:0| RP:PDB:NREP 1 RP:PDB:REP 230->477|1b7eA|2e-06|13.1|245/372| RP:PFM:NREP 1 RP:PFM:REP 199->407|PF01609|1e-07|30.3|175/192|Transposase_11| HM:PFM:NREP 1 HM:PFM:REP 197->409|PF01609|1.3e-23|28.7|171/207|Transposase_11| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF01609|IPR002559| GO:PFM GO:0004803|"GO:transposase activity"|PF01609|IPR002559| GO:PFM GO:0006313|"GO:transposition, DNA-mediated"|PF01609|IPR002559| RP:SCP:NREP 1 RP:SCP:REP 230->477|1b7eA|5e-09|12.2|245/372|c.55.3.4| HM:SCP:REP 255->414|1musA_|1.1e-06|21.9|146/0|c.55.3.4|1/1|Ribonuclease H-like| OP:NHOMO 75 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------B--461-1E15--------------11-----1-------------------------------------H------131------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------3---------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 245 STR:RPRED 50.6 SQ:SECSTR #####################################################################################################################################################################################################################################THHHHHHHHHHHHHGGGGGGEEEEEEEcccHHHHHHHHHHHTcEEEEEEccccccTTTcccHHHHHHTccccEEEEEEcEEEEEEEcEEEEEccTTccEEEEEEEEEccccccccccEEEEEEcccHHHHHHHHHHHHTcTHHHHHHHHHHHHHTTTcccccccHHHHHHHHH#HHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHTTcccTTTccHHHHHHHHHHTc##cccccccTTcHHHHHHHHH####### DISOP:02AL 1-3| PSIPRED ccHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHHHcccccEEEEEEEccEEEEccHHHHHHHHHHHHcHHHHHHHccccccccccccHHHHHHHHHHHHHcccccHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccccccccccccccEEEEEEEccccEEEEEEEEEcccccHHHHHHHHHHHHHHccccccEEEEEEEEcccccHHHHHHHHHcccEEEEEcccccHHHHHHHHcccccccEEccccEEEEEEEEEEcccccccEEEEEEEEccccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHEEEEEEccEEEEEEccccccHHHHHHHHHHHHHHHHHHHHEEEccc //