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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48867.1
DDBJ      :             efflux transporter, RND family, MFP subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  514/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.3.1d.41.2f.46.1
:417 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   76->338 3fppB PDBj 1e-09 21.7 %
:RPS:PDB   54->104 3bg5B PDBj 1e-04 17.6 %
:RPS:PDB   209->280 1dczA PDBj 1e-07 12.5 %
:RPS:SCOP  58->104 1qpnA2  d.41.2.1 * 7e-04 18.6 %
:RPS:SCOP  199->390 1iu4A  d.3.1.8 * 4e-25 7.9 %
:HMM:SCOP  63->331 1vf7A_ f.46.1.1 * 1.7e-07 22.6 %
:HMM:PFM   77->233 PF00529 * HlyD 4.2e-12 20.5 132/306  
:HMM:PFM   22->84 PF03748 * FliL 0.00013 22.2 63/149  
:BLT:SWISS 50->394 MACA_SHIFL 1e-18 23.9 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48867.1 GT:GENE ABO48867.1 GT:PRODUCT efflux transporter, RND family, MFP subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 332674..333927 GB:FROM 332674 GB:TO 333927 GB:DIRECTION + GB:PRODUCT efflux transporter, RND family, MFP subunit GB:NOTE TIGRFAM: efflux transporter, RND family, MFP subunit PFAM: secretion protein HlyD family protein KEGG: bmb:BruAb1_1658 HlyD family secretion protein GB:PROTEIN_ID ABO48867.1 GB:DB_XREF GI:134050896 InterPro:IPR003997 InterPro:IPR006143 LENGTH 417 SQ:AASEQ MKIIRDWGLKEFIKQKSKKSLGIALIVAIALTGGTTYWLQRQSADKSSEPQYEQAQVKKEDIIVGLDSDGTIDFSKVKLRFGVRGTIAEILVAEGDEIQKGQIIARLDDRDYQDQYQLALAKLQDAQDDDTISLLDSELKIKSMEADLEKLRDEYKEMETISDAYSTNELKMKKLELDNKEMEYQNLLKKYQLDKSKGLDQNELQVKMAKEDLEDTIVYAPVSGVLLNLANKAGESLTDEDDFATIHENKTIKAITKVIEYDIGQIKVGQKVYVNVEALPDKKFTGVVSKINALPEEDSSGLVNYSVEMTIKDPGPELKDGMTCSVSFVLKEVADCLTVPYKAVKMVNGKQMVTVVDEKGQQVERQIKTGFTDGTSVEVLEGLKNGETVIYAKPITTKTNATQQKTNSTSQTKRVIF GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 50->394|MACA_SHIFL|1e-18|23.9|326/371| COIL:NAA 40 COIL:NSEG 1 COIL:REGION 129->168| TM:NTM 1 TM:REGION 20->42| SEG 105->130|arlddrdyqdqyqlalaklqdaqddd| SEG 396->413|ttktnatqqktnstsqtk| BL:PDB:NREP 1 BL:PDB:REP 76->338|3fppB|1e-09|21.7|244/267| RP:PDB:NREP 2 RP:PDB:REP 54->104|3bg5B|1e-04|17.6|51/1074| RP:PDB:REP 209->280|1dczA|1e-07|12.5|72/77| HM:PFM:NREP 2 HM:PFM:REP 77->233|PF00529|4.2e-12|20.5|132/306|HlyD| HM:PFM:REP 22->84|PF03748|0.00013|22.2|63/149|FliL| RP:SCP:NREP 2 RP:SCP:REP 58->104|1qpnA2|7e-04|18.6|43/115|d.41.2.1| RP:SCP:REP 199->390|1iu4A|4e-25|7.9|189/331|d.3.1.8| HM:SCP:REP 63->331|1vf7A_|1.7e-07|22.6|221/237|f.46.1.1|1/1|HlyD-like secretion proteins| OP:NHOMO 921 OP:NHOMOORG 516 OP:PATTERN -------------------------------------------------------------------- 346--1-------------------------------------1-----------------------------------11--1-2-14434-633---12413282314---------------3333312334322233---11332422211221-11111313363-111111111111---112222-1111111111111111-111-11111---1--21111172----------------------------------------------111-----1111111111111----------------------137414-----1-2-2-122-----11-----3155542323231212-114412--3111--1-53533135111111111-1112-22112-21-21--3311212221213--1--4---------------2----131------------------------------1--2--111--1111-21111--1-2222-2----213-1-1-1-1314121--11421211111111113211141122--13-14111-2214343441--125241--1-111111-1-------1111-11231122123111343323332231446334--121--------11---111111111211-11111111111211111111112122111-1111111-11111111111111-322222222222--1-221221224115-13321-12-------1---1---11--1224222531111-2212-----------11222222332324512222111--------11--11111-1--11-----------------------------11-11111-41 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 326 STR:RPRED 78.2 SQ:SECSTR #####################################################EEcccTTcEEcTTcEEEEEEcccEEEEccccEEEEEEcccTTcEEcTTcEEEEcccHHHHHHHHHHHH###########HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEcccccEEEEEcccTTcEEcTTcEEEEEEETTEEEEEEccccEEEEEEcccTTcccccTcEEcccEEEcccccccccEEccccEEEEEEcccEEcccccccTTcEEEEEEccccEEEEEcEcGGGcEEccccEEEEcccccccccEEccEEEEEETTEEEEEEcccTTcEEc########################### DISOP:02AL 1-1,39-53,399-412| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEcccccEEEEEEcccccEEEcccEEEEccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccEEEEEEEEccccEEcccccEEEEEEccEEEEEEEEcHHHHHHcccccEEEEEEEEccccEEEEEEEEEEEccccccccEEEEEEEEEEEccccccccccEEEEEEEEcccccEEEccHHHEEEcccEEEEEEEEcccEEEEEEEEEEEEEccEEEEEEccccccEEEEcccccccccccccccccccccEEEcc //