[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48872.1
DDBJ      :             integral membrane sensor signal transduction histidine kinase
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  838/915 : Eukaryota  110/199 : Viruses  1/175   --->[See Alignment]
a.274.1a.30.2d.122.1
:480 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   264->479 3dgeA PDBj 5e-29 36.1 %
:RPS:PDB   200->480 2bu6A PDBj 8e-30 11.4 %
:RPS:SCOP  200->252 2aswA1  a.274.1.1 * 8e-09 30.2 %
:RPS:SCOP  246->311 2c2aA1  a.30.2.1 * 2e-09 25.8 %
:RPS:SCOP  337->479 1b3qA3  d.122.1.3 * 1e-22 22.4 %
:HMM:SCOP  235->329 2c2aA1 a.30.2.1 * 1.6e-18 40.0 %
:HMM:SCOP  329->479 2c2aA2 d.122.1.3 * 1.1e-40 43.3 %
:RPS:PFM   197->249 PF00672 * HAMP 3e-06 42.3 %
:RPS:PFM   269->311 PF00512 * HisKA 2e-04 44.2 %
:RPS:PFM   372->479 PF02518 * HATPase_c 3e-19 40.2 %
:HMM:PFM   370->479 PF02518 * HATPase_c 2.1e-31 40.7 108/111  
:HMM:PFM   261->326 PF00512 * HisKA 1.6e-20 40.9 66/68  
:HMM:PFM   180->248 PF00672 * HAMP 4.8e-15 39.7 68/70  
:BLT:SWISS 251->478 PHOR_BACSU 5e-33 42.7 %
:PROS 461->476|PS00012|PHOSPHOPANTETHEINE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48872.1 GT:GENE ABO48872.1 GT:PRODUCT integral membrane sensor signal transduction histidine kinase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 338029..339471 GB:FROM 338029 GB:TO 339471 GB:DIRECTION + GB:PRODUCT integral membrane sensor signal transduction histidine kinase GB:NOTE PFAM: ATP-binding region, ATPase domain protein domain protein; histidine kinase, HAMP region domain protein; histidine kinase A domain protein domain protein KEGG: dsy:DSY4316 hypothetical protein GB:PROTEIN_ID ABO48872.1 GB:DB_XREF GI:134050901 InterPro:IPR003594 InterPro:IPR003660 InterPro:IPR003661 InterPro:IPR004358 InterPro:IPR005467 InterPro:IPR006162 InterPro:IPR008358 LENGTH 480 SQ:AASEQ MKNKKTSWFKICAPNSLRIQLLSRSLLILAVLLGLIGLLQYVFMQEVIYRNKAASLQSQVMSISRHFWQDFSLESEKNRSPRFFIPEADLAFVDTAGNYFVLSERHGNIRPPQLNIQEYLASFEGRPRLNYKIIKDDSGVEQLVVLQRVFDHGKVLGVVQINTMTGPLKELLFRQLFTFLFLSLIALLMGLLSFSPIIKRTLVPLFNMVDTAEQIDAGNLTKRFPTQQGQMEIDRLADSFNGMLDRLEASFEAERETKEQMRRFIGDASHELRTPLTSIHGFLEVLLRGAANQPDQLNKALKSMYGESERMNKLVHDLLLLTKLDHAPRLEVKEGFLDTVIQEMEPQLCILAGNRRLQLMVDSNIECKFDTDKMKQVILNLFHNAVQHTDPEKGEIKISLYKRTDGVQLSVEDNGPGIKDFHLPKVFDRFYRIDASRTRRHGGAGLGLAITKAIIDAHGGTINVESLEGTGSTFHIWLPA GT:EXON 1|1-480:0| BL:SWS:NREP 1 BL:SWS:REP 251->478|PHOR_BACSU|5e-33|42.7|227/579| PROS 461->476|PS00012|PHOSPHOPANTETHEINE|PDOC00012| TM:NTM 2 TM:REGION 24->46| TM:REGION 177->198| SEG 16->40|slriqllsrsllilavllgligllq| SEG 171->195|llfrqlftflflsliallmgllsfs| SEG 313->326|klvhdlllltkldh| BL:PDB:NREP 1 BL:PDB:REP 264->479|3dgeA|5e-29|36.1|216/237| RP:PDB:NREP 1 RP:PDB:REP 200->480|2bu6A|8e-30|11.4|263/353| RP:PFM:NREP 3 RP:PFM:REP 197->249|PF00672|3e-06|42.3|52/69|HAMP| RP:PFM:REP 269->311|PF00512|2e-04|44.2|43/69|HisKA| RP:PFM:REP 372->479|PF02518|3e-19|40.2|107/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 370->479|PF02518|2.1e-31|40.7|108/111|HATPase_c| HM:PFM:REP 261->326|PF00512|1.6e-20|40.9|66/68|HisKA| HM:PFM:REP 180->248|PF00672|4.8e-15|39.7|68/70|HAMP| GO:PFM:NREP 7 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 200->252|2aswA1|8e-09|30.2|53/54|a.274.1.1| RP:SCP:REP 246->311|2c2aA1|2e-09|25.8|66/89|a.30.2.1| RP:SCP:REP 337->479|1b3qA3|1e-22|22.4|143/174|d.122.1.3| HM:SCP:REP 235->329|2c2aA1|1.6e-18|40.0|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 329->479|2c2aA2|1.1e-40|43.3|150/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 12277 OP:NHOMOORG 973 OP:PATTERN -----------------------27--1-459--11-1222242A-3A7MG39--------------6 BUl4G46677744477766-6B3387666666C9AA68A86DAD9664687458944411A9P3H5AGEE8444455554I7511545ZbnU-e223--A6U8FCeUlUe--------------2532A65387J6icZXXG7Bm2*aimUUEDD89223344LT9Vzz*F341332342322PD933344DCFSSTSUSVTJVUVYXRIEDCEDTVbAEEM7LI988988jh6666766666666666555585757754445664476555565575888555554444444444444444444444544463444243465XFGsNNMRRSQNNMDSSR9EHAMJH638CEG6WUSMGB47757665226NHPYSSI33333GDSOSEACKLNLM8978988778F-IIOHMPLNDKN3KJJMONHQQRGGDJDAJD5CCABC9J83333333388755*IM22112---11381-11113112221111114AF656653BUNQQUUKEEEBQQTcJJII9HTZWOPSV-6JPEUJIA9PPLLM3FOQ8FAAJ7111222276GCP*SmbJFDmG6*fRQV3tluzqpqFWgcuh**EZ41-13111--2---------9824F44IG8XJRO5SMEHBFFEFGDIFFEFJEGGKO--2A6FD------GCECEEAFEEGFGFHEF-EHGEFFFEEFEFFEFFFFGGGHBC8A7EEDEEGEEEFFFFFEGHDD9DCDF5-EDEFGGFBEGGF--28666669A997Hm8P222131-32231113CCBCD5C683DFQPSQOZYXPSRVRONRR2222133129HECKGGGHGOOMNNPKKKLKKHJK5555--*4SSDFJJ111111123-1-------------------------3B445464445j2 --1-BA-------1D57442333525333122233332222223334644563644454445322----4-1211------3332322-2227351212254288D-8-31-----------------------------------------------4----3---------1--553C1-112Q1184-81-91112 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- STR:NPRED 284 STR:RPRED 59.2 SQ:SECSTR ####################################################################################################################################################################################################HHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHHHGGGcccTTcTTTTHHTTcEEEcHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTcEEEEEHHHHHHHHHHHHHHHcEEEEEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHHHHHTTTcccEEEEcccEEEEEEEEEEEcccHHHHHHHTcTTTcccGGccccTcccccHHHHHHHHHHHTTcEEEEEEETTEEEEEEEEEEc DISOP:02AL 1-5,436-438,440-440| PSIPRED cccccccEEEEEccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEHHHcccccccccccccHHHHHccccEEEEEEcccccccccccHHHHHHHHcccccEEEEEEEccccEEEEEEEEEEEEccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEccHHHHHHHHHHHHHHHHHHcccEEEEccccEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEEEccEEEEEEEEccccccHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccEEEEEEEccccEEEEEEccc //