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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48873.1
DDBJ      :             transcriptional regulator, MarR family
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  110/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:150 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->142 1s3jA PDBj 2e-14 36.5 %
:RPS:PDB   7->147 2a61A PDBj 7e-18 23.7 %
:RPS:SCOP  16->140 2fbiA1  a.4.5.28 * 1e-20 26.8 %
:HMM:SCOP  6->139 1jgsA_ a.4.5.28 * 4.5e-28 34.3 %
:RPS:PFM   35->90 PF01047 * MarR 2e-05 44.6 %
:HMM:PFM   35->92 PF01047 * MarR 3.8e-18 39.7 58/59  
:BLT:SWISS 4->142 YUSO_BACSU 2e-18 35.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48873.1 GT:GENE ABO48873.1 GT:PRODUCT transcriptional regulator, MarR family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 339628..340080 GB:FROM 339628 GB:TO 340080 GB:DIRECTION + GB:PRODUCT transcriptional regulator, MarR family GB:NOTE PFAM: regulatory protein, MarR KEGG: btl:BALH_0603 transcriptional regulator, MarR family GB:PROTEIN_ID ABO48873.1 GB:DB_XREF GI:134050902 InterPro:IPR000835 LENGTH 150 SQ:AASEQ MTDKNMKEYAKRIETAFSKIMKKLGPEMSKLAEGLTPPQFFVLKLLQTNGRTVTEIAELMNVQPSAITAILDRMYRNGFIIRERNETDRRVVLVQITEKGKEAFVKSQQKRQDVMLHFLSYLEKEDLDALLAIYEKMAKIVERHSNKTSS GT:EXON 1|1-150:0| BL:SWS:NREP 1 BL:SWS:REP 4->142|YUSO_BACSU|2e-18|35.3|139/155| BL:PDB:NREP 1 BL:PDB:REP 13->142|1s3jA|2e-14|36.5|126/136| RP:PDB:NREP 1 RP:PDB:REP 7->147|2a61A|7e-18|23.7|139/142| RP:PFM:NREP 1 RP:PFM:REP 35->90|PF01047|2e-05|44.6|56/59|MarR| HM:PFM:NREP 1 HM:PFM:REP 35->92|PF01047|3.8e-18|39.7|58/59|MarR| GO:PFM:NREP 3 GO:PFM GO:0003700|"GO:transcription factor activity"|PF01047|IPR000835| GO:PFM GO:0005622|"GO:intracellular"|PF01047|IPR000835| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF01047|IPR000835| RP:SCP:NREP 1 RP:SCP:REP 16->140|2fbiA1|1e-20|26.8|123/136|a.4.5.28| HM:SCP:REP 6->139|1jgsA_|4.5e-28|34.3|134/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 194 OP:NHOMOORG 115 OP:PATTERN ------12-------1----------------------------------------------22---- -----------------------------------------------------1-1------------------------1------------------------1----------------------------1-1----21------------------------------------------------126333333443343434-122553342112-1111111226------------------------------------------1111-----------------------------------------------1------1------22-----2---1--11--1311--1---12-----1--------------------------------------------------------------1--------1------------------------------------------------------------------------------------------------------------------------------------1----------1--1----11--------------------------------1---111--1111-111111--111121--------------------------------------------------------------------------------------------------1---------------------------------------------------------------------11-111111-1--------------------------------------------------------------21----1-11--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 147 STR:RPRED 98.0 SQ:SECSTR ccccccHHHHHHHHHHHHHHHHHHHTTHHHHHHTccHHHHHHHHHHHHHcccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHTTc### DISOP:02AL 1-5,139-151| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccc //