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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48880.1
DDBJ      :             PTS system, glucose subfamily, IIA subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  401/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.84.3d.95.1
:622 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   377->449 3bp3A PDBj 3e-08 41.1 %
:BLT:PDB   470->622 1glaF PDBj 2e-34 41.8 %
:RPS:PDB   377->454 3bp3A PDBj 6e-20 48.7 %
:RPS:PDB   480->617 3csqA PDBj 3e-19 10.1 %
:RPS:SCOP  381->454 3bp8C1  d.95.1.1 * 2e-19 48.6 %
:RPS:SCOP  480->622 1f3gA  b.84.3.1 * 1e-34 43.4 %
:HMM:SCOP  380->455 1o2fB_ d.95.1.1 * 3.6e-20 40.8 %
:HMM:SCOP  471->622 2gprA_ b.84.3.1 * 1e-52 51.3 %
:RPS:PFM   16->299 PF02378 * PTS_EIIC 4e-39 45.3 %
:RPS:PFM   382->415 PF00367 * PTS_EIIB 2e-06 52.9 %
:RPS:PFM   480->604 PF00358 * PTS_EIIA_1 2e-39 53.6 %
:HMM:PFM   13->299 PF02378 * PTS_EIIC 7e-68 40.8 277/321  
:HMM:PFM   477->605 PF00358 * PTS_EIIA_1 2.1e-50 50.4 129/133  
:HMM:PFM   382->415 PF00367 * PTS_EIIB 4.7e-16 47.1 34/35  
:BLT:SWISS 2->606 PTW3C_BACSU e-141 46.7 %
:PROS 542->554|PS00371|PTS_EIIA_TYPE_1_HIS
:PROS 394->411|PS01035|PTS_EIIB_TYPE_1_CYS
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48880.1 GT:GENE ABO48880.1 GT:PRODUCT PTS system, glucose subfamily, IIA subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(345821..347689) GB:FROM 345821 GB:TO 347689 GB:DIRECTION - GB:PRODUCT PTS system, glucose subfamily, IIA subunit GB:NOTE TIGRFAM: PTS system, glucose subfamily, IIA subunit; PTS system, glucose-like IIB subunint PFAM: sugar-specific permease, EIIA 1 domain; phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC KEGG: cno:NT01CX_0332 PTS enzyme II, ABC component GB:PROTEIN_ID ABO48880.1 GB:DB_XREF GI:134050909 InterPro:IPR001127 InterPro:IPR001996 InterPro:IPR003352 InterPro:IPR011535 InterPro:IPR013013 LENGTH 622 SQ:AASEQ MKKAFKYLQMVGQSLMLPVSVLPAAGLLLRFGEKDLLNMPAMKEAGLAIFANLPLIFAVGVAIGFSGGQSVAALAAVVGQLILLAVLKAVDPSINMGVFSGIIMGITAALLYKRFYQIKLPQYLGFFAGKRFVPIITAVAGVVIALISAVVWPSIQNVIDAVGQVAVSSSFGPALFAAGKRLLIPVGLHHVYYPSFLYEFGQYVTAAGEIVKGDFNRYFAGDPTAGTFMASEFPIMMFGLPAAAFAIYRNARPERKKAIAGLMASAAFTSFLTGITEPIEFSFIFVAPVLFVFHVLMAGVSGFVTNLLDIHLGFTFSASFIDYLLSYKYGHNQLLLWPVGLVVGGLYFVVFNTAIKMLNLKTPGREDEITAVENQGTGSDLAHKVLDALGGANNIEILDACITRLRVTVKDPDMVKKDVFKALGASGVMEMGKNLQIIFGTQSDSLKEEIRSLMTNTVSATAEGAKPLPELNVSASKTMIKAPASGKVIPLEQVPDETFKQKLLGNGVAIEPVEGTFIAPVAGTVVQVFPTNHALTIKTENGIEILLHVGINTVSLKGQGFKALVSEGQKVTVGQKLLEVDLKQIEKAGLSTITPVIIIGSEDMEITPANEVTSGEDTILQI GT:EXON 1|1-622:0| BL:SWS:NREP 1 BL:SWS:REP 2->606|PTW3C_BACSU|e-141|46.7|604/631| PROS 542->554|PS00371|PTS_EIIA_TYPE_1_HIS|PDOC00528| PROS 394->411|PS01035|PTS_EIIB_TYPE_1_CYS|PDOC00795| TM:NTM 10 TM:REGION 8->30| TM:REGION 43->65| TM:REGION 69->91| TM:REGION 94->112| TM:REGION 132->154| TM:REGION 158->179| TM:REGION 184->206| TM:REGION 228->249| TM:REGION 289->311| TM:REGION 334->356| SEG 334->351|lllwpvglvvgglyfvvf| BL:PDB:NREP 2 BL:PDB:REP 377->449|3bp3A|3e-08|41.1|73/79| BL:PDB:REP 470->622|1glaF|2e-34|41.8|153/161| RP:PDB:NREP 2 RP:PDB:REP 377->454|3bp3A|6e-20|48.7|78/79| RP:PDB:REP 480->617|3csqA|3e-19|10.1|138/324| RP:PFM:NREP 3 RP:PFM:REP 16->299|PF02378|4e-39|45.3|276/313|PTS_EIIC| RP:PFM:REP 382->415|PF00367|2e-06|52.9|34/35|PTS_EIIB| RP:PFM:REP 480->604|PF00358|2e-39|53.6|125/132|PTS_EIIA_1| HM:PFM:NREP 3 HM:PFM:REP 13->299|PF02378|7e-68|40.8|277/321|PTS_EIIC| HM:PFM:REP 477->605|PF00358|2.1e-50|50.4|129/133|PTS_EIIA_1| HM:PFM:REP 382->415|PF00367|4.7e-16|47.1|34/35|PTS_EIIB| GO:PFM:NREP 8 GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF02378|IPR003352| GO:PFM GO:0008982|"GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"|PF02378|IPR003352| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF02378|IPR003352| GO:PFM GO:0016020|"GO:membrane"|PF02378|IPR003352| GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF00358|IPR001127| GO:PFM GO:0006810|"GO:transport"|PF00358|IPR001127| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF00358|IPR001127| GO:PFM GO:0016020|"GO:membrane"|PF00358|IPR001127| RP:SCP:NREP 2 RP:SCP:REP 381->454|3bp8C1|2e-19|48.6|74/75|d.95.1.1| RP:SCP:REP 480->622|1f3gA|1e-34|43.4|143/150|b.84.3.1| HM:SCP:REP 380->455|1o2fB_|3.6e-20|40.8|76/0|d.95.1.1|1/1|Glucose permease domain IIB| HM:SCP:REP 471->622|2gprA_|1e-52|51.3|152/0|b.84.3.1|1/1|Duplicated hybrid motif| OP:NHOMO 1687 OP:NHOMOORG 403 OP:PATTERN -------------------------------------------------------------------- ----2311224-5------------2-----------333-----1-22-2--13--------523345411---3112---2-----------------------------------------------------------------------------------------------------1-----3-25444444455444444868886544233126924462523377777777777777444578A-4861265AIG227B32745232344455554445555545554544444444444444556535554---9HDDDEDCE5C5-J11265511-3-423-----1---1--322--24---244---------------------------------1-----------------------------------------------------------------------------------2--------222222222222222222222222--2-----1------------------4----------------------------------------------------------------------2--677-----1-42222223122222211222-------22-22269663A45557777766-55566686575767656659A8A93453533343343334333655466663-644334443444--2---------------111342111112113------------22222323-------------------56663333344733-----------------4------44344444-------7---71411222145131---------------- -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------3----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 246 STR:RPRED 39.5 SQ:SECSTR ########################################################################################################################################################################################################################################################################################################################################################################################cccccHHHHHHHTTcGGGEEEEEEcccEEEEEEccGGGccHHHHHHTTccEEEEETTEEEEEcGGGHHHHHHHHHHHHEEEEEEEcTTcEEcccccccTTcEEcccccccEEEEEEcTTcTTTcTTcccEEEcccccccEEEccccEEEEEEETTTTEEEEEEcccEEcTTccEEcEEEEEEccccccccTTcEEcTTcEEEEEEEEEccccccEEEcccEEEcHHHHcccTTcEEEEcTTccEEE DISOP:02AL 1-1,365-381,454-479| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHccHHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHEEEccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccEEcccccEEEcHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEccccHHHHHHHHccccccccEEEEEHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHcccEEEEEEEcHHHccHHHHHHccccEEEEEccEEEEEEcccHHHHHHHHHHHHccccccccccccccccccccccccEEEcccEEEEEEHHHcccHHHccccccccEEEEEcccEEEEEEEEEEEEEEccccEEEEEEccccEEEEEEccccccccccccEEEEccccEEEcccEEEEEcHHHHHHcccccEEEEEEEccccEEEEEcccEEEcccEEEEc //