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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48904.1
DDBJ      :             4Fe-4S ferredoxin, iron-sulfur binding domain protein
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  58/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1d.58.1e.8.1
:660 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   238->328 1bluA PDBj 9e-07 17.6 %
:RPS:PDB   478->575 2ddmA PDBj 2e-04 25.0 %
:RPS:PDB   579->603 1clfA PDBj 1e-04 36.0 %
:RPS:SCOP  227->345 2fug91  d.58.1.5 * 9e-10 20.5 %
:RPS:SCOP  358->441 1d0eA  e.8.1.2 * 8e-04 16.0 %
:RPS:SCOP  424->570 1fcdA1  c.3.1.5 * 5e-07 15.2 %
:RPS:SCOP  575->611 2v4jB1  d.58.1.5 * 3e-06 13.5 %
:HMM:SCOP  139->563 1coyA1 c.3.1.2 * 3e-34 24.0 %
:HMM:SCOP  577->652 2fug91 d.58.1.5 * 8.4e-15 31.6 %
:HMM:PFM   238->258 PF00037 * Fer4 1.8e-08 47.6 21/24  
:HMM:PFM   579->601 PF00037 * Fer4 7.4e-11 60.9 23/24  
:HMM:PFM   621->640 PF00037 * Fer4 0.00013 50.0 20/24  
:HMM:PFM   144->181 PF00890 * FAD_binding_2 1.7e-09 50.0 38/421  
:BLT:SWISS 3->601 HDRA2_METKA e-172 51.1 %
:PROS 244->255|PS00198|4FE4S_FER_1
:PROS 585->596|PS00198|4FE4S_FER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48904.1 GT:GENE ABO48904.1 GT:PRODUCT 4Fe-4S ferredoxin, iron-sulfur binding domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(375811..377793) GB:FROM 375811 GB:TO 377793 GB:DIRECTION - GB:PRODUCT 4Fe-4S ferredoxin, iron-sulfur binding domain protein GB:NOTE PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing GB:PROTEIN_ID ABO48904.1 GB:DB_XREF GI:134050933 InterPro:IPR001450 LENGTH 660 SQ:AASEQ MNRIGVFVCWCGSNIGSVVDVPRLATEAAKFPGVVFSTDYKYMCSVPGQDLIVQKISEYRLDKVVIASCSPRLHEQTFRKTLERAGLNPFMMRIANIREQCAWVHSRQKDGATEKAIALVRRAVAKANNTEPLYEERIPVTKRALVIGGGIAGIQAALDIADAGHEVVLVEREPTIGGKSAMLDKTFPTLDCSGUIVTPKMVAVVQHPNIKLYTFAEVCEVSGFIGNFNVRIKQKPKYVDHNKCTGCGTCWEKCPAKVPSEYNLHLGQRKAIYISSPQAVPNKPIIDPKGCRMLLSGKCGVCQKVCQAEAINYKDTEQFFEEQVGAVVMATGYDLFDWAGSYGEYGHSKYPDVISSLQFERLLNSSGPTGGKILRPSDSKEPKSIVFIKCVGSRDESKGKSYCSRACCMYTAKHAQQILEKIEGARVYVFYMDVRTPGKGYEEFYQRSVNEGACYIRGRVSKIYPKGEKLVVRGADTLLGRPVEVETDLVVLATAMTPSRGSDELAKVVGFTTDKDGFYQEAHPKLKPVETNTGGIFLAGCCQGPKDIPDTVSQASAAAAKVIVLLSKDELATNPMVSQIDERRCTGCMACRDVCPFNAIEEKLITDKSMGQGVQRTVAAINTGLCQGCGACAATCRCGAADLKGFTNQQVMSEIIALCI GT:EXON 1|1-660:0| BL:SWS:NREP 1 BL:SWS:REP 3->601|HDRA2_METKA|e-172|51.1|593/656| PROS 244->255|PS00198|4FE4S_FER_1|PDOC00176| PROS 585->596|PS00198|4FE4S_FER_1|PDOC00176| SEG 147->164|igggiagiqaaldiadag| SEG 624->641|glcqgcgacaatcrcgaa| RP:PDB:NREP 3 RP:PDB:REP 238->328|1bluA|9e-07|17.6|74/80| RP:PDB:REP 478->575|2ddmA|2e-04|25.0|92/264| RP:PDB:REP 579->603|1clfA|1e-04|36.0|25/55| HM:PFM:NREP 4 HM:PFM:REP 238->258|PF00037|1.8e-08|47.6|21/24|Fer4| HM:PFM:REP 579->601|PF00037|7.4e-11|60.9|23/24|Fer4| HM:PFM:REP 621->640|PF00037|0.00013|50.0|20/24|Fer4| HM:PFM:REP 144->181|PF00890|1.7e-09|50.0|38/421|FAD_binding_2| RP:SCP:NREP 4 RP:SCP:REP 227->345|2fug91|9e-10|20.5|112/154|d.58.1.5| RP:SCP:REP 358->441|1d0eA|8e-04|16.0|75/259|e.8.1.2| RP:SCP:REP 424->570|1fcdA1|5e-07|15.2|145/186|c.3.1.5| RP:SCP:REP 575->611|2v4jB1|3e-06|13.5|37/69|d.58.1.5| HM:SCP:REP 139->563|1coyA1|3e-34|24.0|338/372|c.3.1.2|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 577->652|2fug91|8.4e-15|31.6|76/0|d.58.1.5|2/2|4Fe-4S ferredoxins| OP:NHOMO 227 OP:NHOMOORG 91 OP:PATTERN ------1111111111-------4--------2211-22211222222112222----------3--- ---1-----------------------------------------------------------------------------1-11-------1--------------------------------1331111131----------1--1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------16--7722-124--------4---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-------------------DD33754243333-2321212--1111--5I-------------------------11------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 328 STR:RPRED 49.7 SQ:SECSTR ###################################################################################################################################################################################################cccHHHHHHHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHHHEEEcTTcccccTTGGGcTTccEEEccccEEEcGGGcEEEccccccHHHcTTTTTHHHHHccccHHHHHcTTccEEEcTTccccHHHHHHHH##################################################################################HHHHHHHHHHHHTTTcTTcEEEEcccccccHHHHHHHTTTTTccEEHHccTTcccEEEEcGGGcHHHHHTcccccHHHHHHHHHHHcHccccccEccEEEEEccETEEEEEEEEccccccccHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHTTcccccccc###EEcTTTcccccTTTTTcTTccccccTTccH#################################################### DISOP:02AL 1-1| PSIPRED cccEEEEEEcccccccccccHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHcccccEEEEEEEEcccEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEccccEEEEcccHHHHHHHHHHHccccEEEEEEccccccccccHHHHHcccccccccccHHHHHHHHccccEEEEEEEEEEccccccccEEEEEccccccccHHHHHHHcHHHHHccccccccccccccccccccccHHHccccEEEEcHHHEEEccccccHHHHHHcccccEEEEccccEEEEEccEEEEEcccccccccccccccccccccccccHHHHHHHHccccccccEEEEEccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccHHHHHHHHHHcccEEEccEEEEEEEcccEEEEEEEEccccEEEEEEccEEEEEEEEEcccccccHHHHHcccccccccEEEcccccccEEcccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccEEEEEcHHHHHHHHHHHHHccccccccEEEEcccccccccEEEEEcccHHHccccHHHHHccccHHHcccccHHHHHHHHHHHcc //