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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48978.1
DDBJ      :             protein of unknown function DUF162
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  306/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.1.2c.124.1
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   151->258 2g40A PDBj 5e-05 34.1 %
:BLT:PDB   276->339 1fdx- PDBj 2e-04 41.5 %
:RPS:PDB   42->192 3byqA PDBj 2e-05 11.6 %
:RPS:PDB   175->342 1d0cA PDBj 4e-06 8.3 %
:RPS:SCOP  141->258 2g40A1  c.124.1.7 * 6e-07 29.7 %
:RPS:SCOP  248->342 1nekB1  a.1.2.1 * 1e-06 13.7 %
:HMM:SCOP  40->259 2g40A1 c.124.1.7 * 8.7e-38 41.4 %
:HMM:SCOP  187->343 1h7wA1 a.1.2.2 * 3.3e-12 23.6 %
:RPS:PFM   156->258 PF02589 * DUF162 3e-28 54.4 %
:HMM:PFM   151->258 PF02589 * DUF162 1.3e-34 45.4 108/109  
:HMM:PFM   3->46 PF05667 * DUF812 0.00083 20.5 44/594  
:BLT:SWISS 5->342 YKGF_ECOLI 1e-36 26.9 %
:PROS 276->287|PS00198|4FE4S_FER_1
:PROS 326->337|PS00198|4FE4S_FER_1
:COIL

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48978.1 GT:GENE ABO48978.1 GT:PRODUCT protein of unknown function DUF162 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(472972..474000) GB:FROM 472972 GB:TO 474000 GB:DIRECTION - GB:PRODUCT protein of unknown function DUF162 GB:NOTE PFAM: protein of unknown function DUF162 KEGG: chy:CHY_0147 iron-sulfur cluster-binding protein GB:PROTEIN_ID ABO48978.1 GB:DB_XREF GI:134051007 InterPro:IPR001450 InterPro:IPR003741 LENGTH 342 SQ:AASEQ MNTTAKAEKILGQIQAQRETLLADYSTLAQKVQNLKSSTARELNKMVGRATTMLKVKGCQVFLAKDPSEAREQVLKILSTNQKALISKDPIFTEINLHQFLQEKNVKLVQTDLGERVAPLSIDVHPRMASINTSVMDKEHLLQLKNDIREESSQTDFGITGADAIIAETGTIALLESEGNVRLTSNLPYNHIVIAGVEKIVPTLEDALTVCRTSSIYGLGKDLLNYISFISGPSRTADIEFRMVQGMHGPKEVYVILVDNGRMAASKKGEFDALKCLHCGGCLVDCPAYLKKGLKFGYHYSGKRKAILSKFLSGESSPYQEECTYCLDCEKCNTICPVGLKI GT:EXON 1|1-342:0| BL:SWS:NREP 1 BL:SWS:REP 5->342|YKGF_ECOLI|1e-36|26.9|327/475| PROS 276->287|PS00198|4FE4S_FER_1|PDOC00176| PROS 326->337|PS00198|4FE4S_FER_1|PDOC00176| COIL:NAA 25 COIL:NSEG 1 COIL:REGION 11->35| BL:PDB:NREP 2 BL:PDB:REP 151->258|2g40A|5e-05|34.1|91/164| BL:PDB:REP 276->339|1fdx-|2e-04|41.5|41/54| RP:PDB:NREP 2 RP:PDB:REP 42->192|3byqA|2e-05|11.6|147/183| RP:PDB:REP 175->342|1d0cA|4e-06|8.3|156/416| RP:PFM:NREP 1 RP:PFM:REP 156->258|PF02589|3e-28|54.4|103/109|DUF162| HM:PFM:NREP 2 HM:PFM:REP 151->258|PF02589|1.3e-34|45.4|108/109|DUF162| HM:PFM:REP 3->46|PF05667|0.00083|20.5|44/594|DUF812| RP:SCP:NREP 2 RP:SCP:REP 141->258|2g40A1|6e-07|29.7|101/164|c.124.1.7| RP:SCP:REP 248->342|1nekB1|1e-06|13.7|95/132|a.1.2.1| HM:SCP:REP 40->259|2g40A1|8.7e-38|41.4|174/0|c.124.1.7|1/1|NagB/RpiA/CoA transferase-like| HM:SCP:REP 187->343|1h7wA1|3.3e-12|23.6|140/182|a.1.2.2|1/1|alpha-helical ferredoxin| OP:NHOMO 570 OP:NHOMOORG 339 OP:PATTERN 11---11111111111-1111211111--1111-1--------------------------1112--- 222-111-----1--------1---1------1222-122-1----11-----1-12------2111111-----------21-----1111-111-----1---321-3--------------------------21222----1-------------------------------------12-11---12244444224242422422222222422212-2------222-------------------1---11-------1111-1----1-1------------------------------------------------------------------------1--2-55-42---32-----2--21---------11-----------------------11-11-111----------------1-----1----1--1111111111111223----------------------------------1-----3225233444233334444243433334--222--------1----1----111111111---424-23-3244132444-2-2--22121111---41--1-222222222112222--1----2---1-1--2311111-111111111111-----2-2------1-211--1111111111-111111211111111-11----1---2------------------1-1111-----------------------------1--2221-12----1111----------1------11------1----------------2--------11-----------------------------------------------------------------------1- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 87.7 SQ:SECSTR #########################################cEEEEEEEEEEEcccccccccccEEEEEEEE#EEEcTTTTccccccHHHHHHHHHHHHHHHHHcGGGccEEEEEEEEcTTccHHcccccEEEEEccTTccEEEEETcGGGcEEEEEccTTcccEEEEcccEEEEEETTTTEEEEccGGGGccccccccTTccHcccTTccccTTTccccccccccHHHHHHHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHTcTTcTTGGGTTccEEEEcTTcccHHHHHHHHHHHHHHHcHHHHHGGGcccc DISOP:02AL 1-5| PSIPRED cccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccHHHHHHHcccEEEcccHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccEEEEEcccccHHHHHHcccEEEEEEEHHHHcccHHHHHHHHHHHHHHHccccccccEEEEEccccccccccEEEEEccccEEEEEEEEccccccccccHHHHHHHHccccccccccccEEcccccccccccccHHHHHHHHHccccHHHHHHHHHHcccccccccccccccc //