[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO48979.1
DDBJ      :             CoB--CoM heterodisulfide reductase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  557/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.1.2c.124.1c.39.1d.349.1
:722 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   313->394 3cf4A PDBj 3e-04 30.0 %
:RPS:PDB   61->229 3byqA PDBj 3e-22 9.6 %
:RPS:PDB   213->449 1d0cA PDBj 7e-09 8.9 %
:RPS:SCOP  69->256 1d0sA  c.39.1.1 * 4e-07 13.1 %
:RPS:SCOP  282->395 1nekB1  a.1.2.1 * 1e-10 14.9 %
:RPS:SCOP  615->684 2jovA1  d.349.1.1 * 6e-14 17.4 %
:HMM:SCOP  59->296 2g40A1 c.124.1.7 * 5e-35 38.5 %
:HMM:SCOP  259->394 2bs2B1 a.1.2.1 * 4e-15 28.1 %
:RPS:PFM   15->182 PF09074 * Mer2 1e-04 24.8 %
:RPS:PFM   190->295 PF02589 * DUF162 2e-24 46.2 %
:RPS:PFM   506->554 PF02754 * CCG 2e-06 40.0 %
:RPS:PFM   635->689 PF02754 * CCG 9e-08 36.4 %
:HMM:PFM   191->294 PF02589 * DUF162 1.4e-28 37.5 104/109  
:HMM:PFM   506->558 PF02754 * CCG 1.4e-11 26.4 53/64  
:HMM:PFM   633->693 PF02754 * CCG 9.7e-17 36.1 61/64  
:HMM:PFM   313->326 PF00037 * Fer4 3.7e-05 50.0 14/24  
:HMM:PFM   361->375 PF00037 * Fer4 1.8e-05 53.3 15/24  
:BLT:SWISS 53->395 LUTB_GEOSW 3e-51 39.5 %
:BLT:SWISS 456->698 Y1067_METMP 2e-35 36.2 %
:PROS 313->324|PS00198|4FE4S_FER_1
:PROS 363->374|PS00198|4FE4S_FER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO48979.1 GT:GENE ABO48979.1 GT:PRODUCT CoB--CoM heterodisulfide reductase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(473997..476165) GB:FROM 473997 GB:TO 476165 GB:DIRECTION - GB:PRODUCT CoB--CoM heterodisulfide reductase GB:NOTE PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein KEGG: mta:Moth_2305 hypothetical protein GB:PROTEIN_ID ABO48979.1 GB:DB_XREF GI:134051008 InterPro:IPR001450 InterPro:IPR003741 InterPro:IPR004017 LENGTH 722 SQ:AASEQ MGSRSDKIQKNKVALGLQNTDSRKGRFRAFDAIRPAMKKMVKNYPYLSNELRQIKQHCIDNLEEMISKATLSLERKGCHVYVAETTEQAQAHLLSLIPQGVVVKSKTNAGKEINLTHVLEERDIQVIETDLGDRINQLAHSEASHSLAPAIHIPIEKVTEVFSKEMGTQLECSHEALVVAARKGLRDYLINADVGISGANAIAADTGSVFVTENEGNIRAVTMMPKIHIVIAGVEKIVPTLEDALKVVRSAAVYGVGQDIGTYVSVISGTSTCCDPELDELIHGQGPQEVHILFLKHGRQEAIDKGFAESLYCINCGSCLNFCPIYAEIGEKYGYKYLGGRGLVFTAFHGDLQKTVESGLSLCIGCQKCKNSCPVQMNTPEMLKNLRQEQVQQEGLGWKKERMLALLSKPKGLPRLTKVASTFGGTLLKKSKIGVKTRFSLPSLGLPGERLLPAVQKKSFLENAKPKPIENPVKTVAFFPGCVVNYTEPSVGEALLHVLGENKVAVKLAKEDLCCGIPGIVSGDKNYSRQMALRNIEIYSQFDTDALVFVCPSCAVAFKEEYPKLFAKDDPKLLQKVIKLAQKVKDINQFLIEDIELVTIPGSIPEKITYHDPCHLVRSLGITQQPRQLIQTLPGAKFEEMVDADACCGFGGSFSIDYYDLSRRINEGKLTSIENTGATILATSCPGCMLHFRDGITQKNMKQQVFHTIQLLSQTYGRRNKE GT:EXON 1|1-722:0| BL:SWS:NREP 2 BL:SWS:REP 53->395|LUTB_GEOSW|3e-51|39.5|332/475| BL:SWS:REP 456->698|Y1067_METMP|2e-35|36.2|224/494| PROS 313->324|PS00198|4FE4S_FER_1|PDOC00176| PROS 363->374|PS00198|4FE4S_FER_1|PDOC00176| SEG 330->343|gekygykylggrgl| BL:PDB:NREP 1 BL:PDB:REP 313->394|3cf4A|3e-04|30.0|70/766| RP:PDB:NREP 2 RP:PDB:REP 61->229|3byqA|3e-22|9.6|166/183| RP:PDB:REP 213->449|1d0cA|7e-09|8.9|225/416| RP:PFM:NREP 4 RP:PFM:REP 15->182|PF09074|1e-04|24.8|141/179|Mer2| RP:PFM:REP 190->295|PF02589|2e-24|46.2|106/109|DUF162| RP:PFM:REP 506->554|PF02754|2e-06|40.0|49/63|CCG| RP:PFM:REP 635->689|PF02754|9e-08|36.4|55/63|CCG| HM:PFM:NREP 5 HM:PFM:REP 191->294|PF02589|1.4e-28|37.5|104/109|DUF162| HM:PFM:REP 506->558|PF02754|1.4e-11|26.4|53/64|CCG| HM:PFM:REP 633->693|PF02754|9.7e-17|36.1|61/64|CCG| HM:PFM:REP 313->326|PF00037|3.7e-05|50.0|14/24|Fer4| HM:PFM:REP 361->375|PF00037|1.8e-05|53.3|15/24|Fer4| RP:SCP:NREP 3 RP:SCP:REP 69->256|1d0sA|4e-07|13.1|175/346|c.39.1.1| RP:SCP:REP 282->395|1nekB1|1e-10|14.9|114/132|a.1.2.1| RP:SCP:REP 615->684|2jovA1|6e-14|17.4|69/77|d.349.1.1| HM:SCP:REP 59->296|2g40A1|5e-35|38.5|174/0|c.124.1.7|1/1|NagB/RpiA/CoA transferase-like| HM:SCP:REP 259->394|2bs2B1|4e-15|28.1|121/0|a.1.2.1|1/1|alpha-helical ferredoxin| OP:NHOMO 1679 OP:NHOMOORG 616 OP:PATTERN 22---12233333332-2222326522123424332312222312111255541---1--11224--- 4452633----12111-11-1311141111113333135613111-23-----3-22---11223463331---------124121112222-222---114121645-5---------------1-11211-12154588---341111111111111111111121111-1-----1----44344---4446666644646464466544444464553413------432-------------------2---22-------2222-2----212------------------------------------------------------------------------5--5-CC3732--93-----1-234---1-----32211111111111111111-111-33133133311-11111121111112---11311113112222222223323234-----------------------------2--1-222223855A58677757789777747787766622343321221255223333121333333333223546-9A362544434451A8A294723665621683--313333333333333331231122311-3-3--2422222-222222222222----3325------3-5331-4333434344-344444544434444244111131--5111111111111111111313333--111111111111-------------3-31-3333133111-3333-------11-3-1111133-111123-11---------1111511111---33--------------112-111111----------------------------------------------22- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 582 STR:RPRED 80.6 SQ:SECSTR ############################################################cEEEEEEEEEEEcccccccccccEEEEEEEEEEEcTTTTccccccHHHHHHHHHHHHHHHHHcGGGccEEEEEEEEcTTccHHHHTHHHHHHHHHHHTTccccEEEEEccTTccEEEEETTcTTcGGGcEEEEEccTTcccEEEEcccc###TTcccccccGGGccccccccccccTTc##cccTTccccTTTccccccccccHHHHHHHHHHHHHHHHHHTTcTTcHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHTcTTcTTGGGTTccEEcccEEcTTcccHHHHHHHHHHHHHHHHHHGGGccccEEEEcccccTTccccEEcccccccccEEEcTTccEEEcGGGHHHHHHHHHTTccccccccccccEEETTcc##cccccTT##cccccccccccccGGGc#####HHHHHHHHHHTHHHHHHH#####HHHTTccccccccHHHHHGGGTTcEEccH#######HHHHHHTTcTTGGGGcEEccccEEEccccGGGcccccGHHHHHcccTTccEEcccccccccccHHH#Hcc#########ccccccGGGcccTTccHHHHHHT######TcEEEEEcHHHHHHHHTc#######TTccccE###EEEEEEEcT############################ DISOP:02AL 1-6,8-8,719-723| PSIPRED ccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHccccEEEEcccHHHcccHHHHHHcccEEEEccHHHHHHHHccccccEEEEEHHHccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccEEEEEccccccHHHHHcccEEEEEEEHHHHcccHHHHHHHHHHHHHHcccccccccEEEEEcccccccHHHHccccccccccEEEEEccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcHHHHHHHHHcccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHcccccccccccEEEEccccHHcccHHHHHHHHHHHHHcccEEEEccccccccHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEccHHHHHHccccHHHHHHHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEccHHHHHHHHHHHHHccccccEEEHHHHHHHHccccccc //