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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49020.1
DDBJ      :             isopentenyl-diphosphate delta-isomerase, type 2
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  228/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.1.4
:352 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->347 1p0kB PDBj 8e-57 41.0 %
:RPS:PDB   8->321 3dh7A PDBj 4e-75 33.3 %
:RPS:SCOP  23->347 1p0kA  c.1.4.1 * 4e-82 41.6 %
:HMM:SCOP  21->347 1p0kA_ c.1.4.1 * 2.5e-78 33.7 %
:RPS:PFM   167->321 PF01070 * FMN_dh 1e-13 34.1 %
:HMM:PFM   22->103 PF01070 * FMN_dh 1.1e-09 27.5 80/355  
:HMM:PFM   167->321 PF01070 * FMN_dh 1.4e-21 29.0 138/355  
:HMM:PFM   116->182 PF03796 * DnaB_C 8.6e-05 24.6 65/185  
:BLT:SWISS 1->347 IDI2_BACCZ 4e-74 43.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49020.1 GT:GENE ABO49020.1 GT:PRODUCT isopentenyl-diphosphate delta-isomerase, type 2 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 517295..518353 GB:FROM 517295 GB:TO 518353 GB:DIRECTION + GB:PRODUCT isopentenyl-diphosphate delta-isomerase, type 2 GB:NOTE KEGG: mta:Moth_1328 isopentenyl-diphosphate delta-isomerase, FMN-dependent TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase GB:PROTEIN_ID ABO49020.1 GB:DB_XREF GI:134051049 InterPro:IPR000262 InterPro:IPR011179 LENGTH 352 SQ:AASEQ MRLNRKLEHIQFSLQQKSRGGATGFDDITLLHNSLPQLDWGDIDTSCYFLGKKLHVPLLINAMTGGHRELESINGNLAKAAAAAGVALAVGSQRAALEDNSTRYSFSVVREVNPQGVVLANLGADCSLLEARTAIKMINADGIQLHLNAPQELAMAEGDRKFKGILENIQSLSRDLDVPVIVKEVGFGMSRESIQRIGAASVPYIDVGGAGGTDFVAIEEARAGRKTWLKWGIPTAVSLLEGLSMNRAKTQLIASGGIRNALDIVKSLSLGCSLVGMARPLLRVLVEGSSEELNSYLSNIIEDIHRIMLMLGARTLEDLQRVPLIISGNTYHWLCCRGIDVAPYARRAGTSY GT:EXON 1|1-352:0| BL:SWS:NREP 1 BL:SWS:REP 1->347|IDI2_BACCZ|4e-74|43.2|345/349| SEG 77->91|lakaaaaagvalavg| BL:PDB:NREP 1 BL:PDB:REP 23->347|1p0kB|8e-57|41.0|307/309| RP:PDB:NREP 1 RP:PDB:REP 8->321|3dh7A|4e-75|33.3|303/318| RP:PFM:NREP 1 RP:PFM:REP 167->321|PF01070|1e-13|34.1|138/328|FMN_dh| HM:PFM:NREP 3 HM:PFM:REP 22->103|PF01070|1.1e-09|27.5|80/355|FMN_dh| HM:PFM:REP 167->321|PF01070|1.4e-21|29.0|138/355|FMN_dh| HM:PFM:REP 116->182|PF03796|8.6e-05|24.6|65/185|DnaB_C| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01070|IPR000262| RP:SCP:NREP 1 RP:SCP:REP 23->347|1p0kA|4e-82|41.6|303/306|c.1.4.1| HM:SCP:REP 21->347|1p0kA_|2.5e-78|33.7|326/329|c.1.4.1|1/1|FMN-linked oxidoreductases| OP:NHOMO 302 OP:NHOMOORG 293 OP:PATTERN 111111111111111112111111-42----1111111111111111111111111111111111--- ------------1-111----1--12-----111111---------------------------------------------1------------------------------------------1111111111111111---1-11111111111------111-1111------------11111---111111111111111111--11111111---1--11111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--------------------------111--1----1-1-1-1------1----------------------------------------------1-1----11-------1-----------------------------------------1111111111111---------------------------------------------------------------------------------1-------------------------1-11-------------------------------------------------------------1-----------1------------------------------------------------------------------------------------------1111---------------------------------------------1------------1---------11---------------------------11111111--1-------------------------------------- --------211-------------------------------------------------------------------------------2----1------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 349 STR:RPRED 99.1 SQ:SECSTR ##HHHHHccHHHHHHcccccccccGGGEEEcccTTccccGGGccccEEETTEEEcccEEEccccccGGTcTTHHHHHHHHHHHHTcEEEEEEcTTGGGcccccccccccTTTcccccEEEEccGGGGGTccHHHHHHHTccEEEEEccHHHHHHTTTcccccTTHHHHHHHTcccccccEEEEcccccccHHHHHHHTcccccEEEccccTcccHHHHHHHHHHccHHHTccccHHHHHHHHHTTcTccccEEEEcccccHHHHHHHHHTTccEEEEcGGGHHHHHccTHHHHHHHHHHHHHHHHHHHHHHTccccGGGTTGGEEEcccccccHHHHHHHHHHHHHHHTcE# DISOP:02AL 1-3,347-353| PSIPRED ccHHHHHHHHHHHccccccccccccEEEEEcccccccccHHHcccEEEEcccEEcccEEEEccccccHHHHHHHHHHHHHHHHccHHHHHccHHHHHccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHcccEEEEEEcccHHHHccccccHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHccccEEEcccccccccccccHHcccccccccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccHHHHccccEEEcHHHHHHHHHccccHHHHHHHHHccc //