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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49073.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1a.47.2c.143.1c.37.1
:738 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   63->149 2ix3A PDBj 7e-04 42.9 %
:RPS:PDB   11->66 1adrA PDBj 1e-08 33.9 %
:RPS:PDB   119->150 3cmvA PDBj 1e-04 31.2 %
:RPS:PDB   131->252 2awnA PDBj 1e-04 16.4 %
:RPS:SCOP  7->66 1utxA  a.35.1.3 * 1e-08 32.2 %
:RPS:SCOP  79->151 1tpzA  c.37.1.8 * 4e-05 27.5 %
:RPS:SCOP  130->200 1egaA1  c.37.1.8 * 1e-04 16.9 %
:RPS:SCOP  234->395 2hzbA1  c.143.1.1 * 8e-04 13.3 %
:RPS:SCOP  425->534 1dn1B  a.47.2.1 * 2e-04 20.2 %
:HMM:SCOP  10->83 1rioA_ a.35.1.2 * 3.9e-10 29.7 %
:HMM:SCOP  110->405 2akaB1 c.37.1.8 * 1.4e-16 21.7 %
:RPS:PFM   7->60 PF01381 * HTH_3 4e-06 45.3 %
:RPS:PFM   130->299 PF00350 * Dynamin_N 3e-07 28.4 %
:HMM:PFM   130->288 PF00350 * Dynamin_N 2.3e-13 27.0 141/168  
:HMM:PFM   8->56 PF01381 * HTH_3 8.2e-11 43.8 48/55  
:HMM:PFM   110->149 PF03193 * DUF258 0.00026 25.0 40/161  
:BLT:SWISS 130->311 YPBR_BACSU 2e-05 27.9 %
:BLT:SWISS 335->467 Y1505_METJA 2e-04 31.2 %
:BLT:SWISS 635->733 ENTP1_MOUSE 6e-04 30.2 %
:PROS 578->596|PS01332|HTH_RRF2_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49073.1 GT:GENE ABO49073.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(569453..571669) GB:FROM 569453 GB:TO 571669 GB:DIRECTION - GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein KEGG: shw:Sputw3181_1147 hypothetical protein GB:PROTEIN_ID ABO49073.1 GB:DB_XREF GI:134051102 InterPro:IPR000944 InterPro:IPR001387 LENGTH 738 SQ:AASEQ MSDDFDLKGYRENKLKITQAELASWLGVTQDYISKIENGNISVGLDFLLKFCNAVGDTPDGVLNFKLNNPGPLEIGDVYKEIKLKKKMLDLHVQPRIEKFNYDENNYGTALTKIDELYDIINIYGSKPLVAFLGPSDAGKSRLINILTGLDVLLAQWTPTTAATVYLKHIEDKPKWMGSDDVWVFKAESEEKGWDFRRYYDPDYCNQYKVFSGGLEILTKYCNRHTENLYKQVDSAVVYLESEILKACDIVDLPGFGTDNHRDTAQAQRAREKADVVVFLCQSNGFLNHENDLIFLKNVIQCLPPVNLSTNLPVLSNLMIVASQAHIVGESQVENLFRRGYTALDNQLNEGVIRSVFKISKPEFLSQLKNRFFSYSIESTNLRKDFVAELKRLLEEVLPVLRNKLLNNAIQEFINNTGELFADETKKFQLALNERETTKKIYEKKLQGKPRLYAQIQDGREKIIDLIEYLKKEDCQKLKTWEEKNITVKTIEKIIEDKKYTKKQAQQYLASNITDLYFVELQNIVSRSSEVFARESKKLFADIEKTSNEFNKLPMGQVDIPFDFKGAMAGGLAGATVLGGLSVMAASMGNLGGYILVAKGVSVLSAMGVSVGGTAAAASAVAALGGPITIGLALAATAYVLIQAFFGESWKTRLAKQVKEALTKEKVLENYSNEVVKFWDETKTAFLSLVDTIINKYEEHLLDLKVIIETYNEVELRDKVRKSWEMKHFFEEIPWDQS GT:EXON 1|1-738:0| BL:SWS:NREP 3 BL:SWS:REP 130->311|YPBR_BACSU|2e-05|27.9|154/1193| BL:SWS:REP 335->467|Y1505_METJA|2e-04|31.2|125/778| BL:SWS:REP 635->733|ENTP1_MOUSE|6e-04|30.2|86/510| PROS 578->596|PS01332|HTH_RRF2_1|PDOC01035| TM:NTM 3 TM:REGION 567->589| TM:REGION 598->620| TM:REGION 628->650| SEG 566->581|gamagglagatvlggl| SEG 605->626|samgvsvggtaaaasavaalgg| BL:PDB:NREP 1 BL:PDB:REP 63->149|2ix3A|7e-04|42.9|70/972| RP:PDB:NREP 3 RP:PDB:REP 11->66|1adrA|1e-08|33.9|56/76| RP:PDB:REP 119->150|3cmvA|1e-04|31.2|32/1190| RP:PDB:REP 131->252|2awnA|1e-04|16.4|122/330| RP:PFM:NREP 2 RP:PFM:REP 7->60|PF01381|4e-06|45.3|53/55|HTH_3| RP:PFM:REP 130->299|PF00350|3e-07|28.4|148/165|Dynamin_N| HM:PFM:NREP 3 HM:PFM:REP 130->288|PF00350|2.3e-13|27.0|141/168|Dynamin_N| HM:PFM:REP 8->56|PF01381|8.2e-11|43.8|48/55|HTH_3| HM:PFM:REP 110->149|PF03193|0.00026|25.0|40/161|DUF258| GO:PFM:NREP 3 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| GO:PFM GO:0003924|"GO:GTPase activity"|PF00350|IPR001401| GO:PFM GO:0005525|"GO:GTP binding"|PF00350|IPR001401| RP:SCP:NREP 5 RP:SCP:REP 7->66|1utxA|1e-08|32.2|59/66|a.35.1.3| RP:SCP:REP 79->151|1tpzA|4e-05|27.5|69/395|c.37.1.8| RP:SCP:REP 130->200|1egaA1|1e-04|16.9|71/179|c.37.1.8| RP:SCP:REP 234->395|2hzbA1|8e-04|13.3|150/311|c.143.1.1| RP:SCP:REP 425->534|1dn1B|2e-04|20.2|104/222|a.47.2.1| HM:SCP:REP 10->83|1rioA_|3.9e-10|29.7|74/0|a.35.1.2|1/1|lambda repressor-like DNA-binding domains| HM:SCP:REP 110->405|2akaB1|1.4e-16|21.7|253/0|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------1----------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 275 STR:RPRED 37.3 SQ:SECSTR ######HHHHHHHHHTccHHHHHHHHTccHHHHHHHHTTcccccHHHHHHHHHHTTccHHHHHHTcHHcHHHHHHTcHHHHHHHHHccHHHHHHHHHHcHHHHTTccTTcHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHEEEEcccccTTccGGGTcEEEEcccccccHHHHHHHHHHHHccHHHHHHTcccEEEEEcTTTTccHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHcccTTcccHHHHHHHTTGGGcccccEEEEEE######################################################################################################################################################################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-2,737-739| PSIPRED ccccccccccccccEEEEHHHHHHHHcccHHHHHHHHcccEEEEHHHHHHHHHHcccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHccccHHHcccccccccHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHcccHHcccccccccEEEEEEEccccccccccccEEEEEccccccccccccccccccccccEEEccHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccEEEcccccccccHHHHHHHHHHHHHcEEEEEEccccccccccHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccEEEEEEccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHccccHHHHHHHHHHHHHHHHcccccEEEEEcHHHHHHHHccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEcccHHHHHHHHHHHHHHHHHHHHcccccc //