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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49109.1
DDBJ      :             protein of unknown function DUF421
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  96/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:237 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   95->227 3c6fD PDBj 1e-20 36.1 %
:RPS:PDB   95->229 3c6fA PDBj 1e-25 35.6 %
:RPS:PFM   89->158 PF04239 * DUF421 5e-18 51.4 %
:RPS:PFM   168->229 PF04239 * DUF421 3e-06 38.7 %
:HMM:PFM   88->163 PF04239 * DUF421 8.5e-29 50.7 75/99  
:HMM:PFM   169->222 PF04239 * DUF421 2.6e-12 38.9 54/99  
:HMM:PFM   30->91 PF03706 * UPF0104 0.00071 12.5 56/294  
:BLT:SWISS 8->236 YDFS_BACSU 1e-52 53.9 %
:TM
:REPEAT 2|85->160|162->235
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49109.1 GT:GENE ABO49109.1 GT:PRODUCT protein of unknown function DUF421 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 607483..608196 GB:FROM 607483 GB:TO 608196 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF421 GB:NOTE PFAM: protein of unknown function DUF421 KEGG: bsu:BG12166 similar to hypothetical proteins GB:PROTEIN_ID ABO49109.1 GB:DB_XREF GI:134051138 InterPro:IPR007353 LENGTH 237 SQ:AASEQ MAFEPWLILIRTGFAFITLLIAARILGKQTIAQMTFFDFIAAITIGAIGAGFAYHIEKNPFNVLLSLLSFTTIVYITSYLSLKNKLARKIFAGEPTMVIQNGKILEHNMFKMRYDLDHLNHQLRQKGIFDIGQVEFAIVEPNGELSVFKKSQYRPLIPADLKIPTKYEGLAIELIMDGQVIEKNLRENNLSMEWLTTALSQHRITDLKDVAYACLSTNGTLYFDLYKDKITNPVDKG GT:EXON 1|1-237:0| BL:SWS:NREP 1 BL:SWS:REP 8->236|YDFS_BACSU|1e-52|53.9|228/235| TM:NTM 3 TM:REGION 3->25| TM:REGION 33->55| TM:REGION 60->82| NREPEAT 1 REPEAT 2|85->160|162->235| SEG 35->53|tffdfiaaitigaigagfa| BL:PDB:NREP 1 BL:PDB:REP 95->227|3c6fD|1e-20|36.1|133/138| RP:PDB:NREP 1 RP:PDB:REP 95->229|3c6fA|1e-25|35.6|135/137| RP:PFM:NREP 2 RP:PFM:REP 89->158|PF04239|5e-18|51.4|70/80|DUF421| RP:PFM:REP 168->229|PF04239|3e-06|38.7|62/80|DUF421| HM:PFM:NREP 3 HM:PFM:REP 88->163|PF04239|8.5e-29|50.7|75/99|DUF421| HM:PFM:REP 169->222|PF04239|2.6e-12|38.9|54/99|DUF421| HM:PFM:REP 30->91|PF03706|0.00071|12.5|56/294|UPF0104| OP:NHOMO 261 OP:NHOMOORG 97 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------13344444567348565738663574521162--------44---------------------11-11----111111111-11--------------------------------------1---------14253222335313131222111121--1--2133352242111111--1--------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 135 STR:RPRED 57.0 SQ:SECSTR ##############################################################################################cEEEEETTEEcHHHHHHTTccHHHHHHHHHHTTcccGGGEEEEEEcTTccEEEEEcGGGccccTTTTTcccccccccEEEEETTEEcHHHHHHHcccHHHHHHHHHHTTcccGGGEEEEEEcTTcccEEEETTTT######## DISOP:02AL 231-238| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHccccHHHHHHHHHHcccccHHHEEEEEEEccccEEEEEccccccccHHHHcccccccccEEEEEEccEEcHHHHHHccccHHHHHHHHHHcccccHHHEEEEEEEccccEEEEEcccccccccccc //