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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49229.1
DDBJ      :             protein of unknown function DUF162
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  545/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.1.2c.1.15c.1.8c.124.1d.349.1
:714 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   60->223 3byqA PDBj 2e-30 13.5 %
:RPS:PDB   288->403 1d0cA PDBj 3e-05 6.3 %
:RPS:SCOP  8->126 1k77A  c.1.15.5 * 9e-04 23.7 %
:RPS:SCOP  289->396 1nekB1  a.1.2.1 * 8e-08 13.9 %
:RPS:SCOP  519->597 2aamA1  c.1.8.15 * 8e-05 16.5 %
:RPS:SCOP  613->667 2jovA1  d.349.1.1 * 6e-13 10.9 %
:HMM:SCOP  58->296 2g40A1 c.124.1.7 * 1.2e-40 44.7 %
:HMM:SCOP  228->385 1h7wA1 a.1.2.2 * 4.7e-21 22.4 %
:RPS:PFM   192->295 PF02589 * DUF162 1e-18 42.3 %
:RPS:PFM   387->461 PF11870 * DUF3390 9e-05 32.0 %
:RPS:PFM   502->558 PF02754 * CCG 9e-08 38.6 %
:RPS:PFM   632->689 PF02754 * CCG 6e-07 32.8 %
:HMM:PFM   499->555 PF02754 * CCG 1.2e-16 35.1 57/64  
:HMM:PFM   628->689 PF02754 * CCG 5.7e-17 33.9 62/64  
:HMM:PFM   192->294 PF02589 * DUF162 2.7e-27 35.9 103/109  
:HMM:PFM   314->326 PF00037 * Fer4 0.00027 61.5 13/24  
:HMM:PFM   22->83 PF01968 * Hydantoinase_A 0.00095 17.7 62/290  
:BLT:SWISS 4->472 LUTB_GEOTN 9e-65 37.4 %
:BLT:SWISS 475->713 LUTA2_BACCQ 6e-43 38.0 %
:PROS 317->337|PS00028|ZINC_FINGER_C2H2_1
:PROS 314->325|PS00198|4FE4S_FER_1
:PROS 364->375|PS00198|4FE4S_FER_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49229.1 GT:GENE ABO49229.1 GT:PRODUCT protein of unknown function DUF162 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 743430..745574 GB:FROM 743430 GB:TO 745574 GB:DIRECTION + GB:PRODUCT protein of unknown function DUF162 GB:NOTE PFAM: protein of unknown function DUF162; protein of unknown function DUF224, cysteine-rich region domain protein KEGG: ppd:Ppro_3135 protein of unknown function DUF224, cysteine-rich region domain protein GB:PROTEIN_ID ABO49229.1 GB:DB_XREF GI:134051258 InterPro:IPR001450 InterPro:IPR003741 InterPro:IPR004017 InterPro:IPR007087 LENGTH 714 SQ:AASEQ MATGNLKKDINSALNNDNLTGALGRFGEAYLPAREKAYEGKDFEAIREKVSQCKRNAADNLEKLAEQFATQAVKNGAKVFRAKTGEEAKEYIAKIARDHNVKTIIKSKSMASEEIHLNDYLMKHAGIEEVAETDLGEWIIQLCGQRPSHMVMPAIHMTRGEVAEIFSKETNQNLEPDIAKLVKVARENLRNKFLKAEMGISGANIAIAESGTLVMCTNEGNGRLTTTVPPVHVVLVGLEKLVEKFEDVGPILEALPRSATGQKLTSYVTMMTGPTPAIDLDGNIVEQKEMHIVLMDNGRTEMRNDPMFKQALQCIRCASCLNVCPVFQQVGGHVYGHVYTGGIGTILTAFLNSFEKAGELQNLCLRCERCKTYCPGKIDLPGLIAELRRRTVKKEGLPMSQKLILEKVLTNRKLFHSLIRTASVAQKPFVKGNVIRHLPLFFSGLTEGRSLPAVASTPLRDKVGRAVPTGKPKAKVGYYAGCLGDFVYPEQGEAAYKVLNKMGMEVIFPMEQTCCGIPATQMGAPEVAVTLAKQNIEAFEKEGLDYIVSLCPTCVEVLKHHYVDQLKDDPAWKARAEKFAAKVIDFPTFVTKYGQDLKFKNLGTKVTYHDSCHMKRVLNVWKEPRELLNKAGVELVEMKGCDDCCGFGGSYSVKMPEISKAILEKKINNTTATNAAVLALDCPGCKMQIAGGIDAKGKNIAVKHTVELLADALK GT:EXON 1|1-714:0| BL:SWS:NREP 2 BL:SWS:REP 4->472|LUTB_GEOTN|9e-65|37.4|462/476| BL:SWS:REP 475->713|LUTA2_BACCQ|6e-43|38.0|237/242| PROS 317->337|PS00028|ZINC_FINGER_C2H2_1|PDOC00028| PROS 314->325|PS00198|4FE4S_FER_1|PDOC00176| PROS 364->375|PS00198|4FE4S_FER_1|PDOC00176| SEG 224->246|ltttvppvhvvlvgleklvekfe| SEG 331->346|gghvyghvytggigti| SEG 668->676|nnttatnaa| RP:PDB:NREP 2 RP:PDB:REP 60->223|3byqA|2e-30|13.5|156/183| RP:PDB:REP 288->403|1d0cA|3e-05|6.3|111/416| RP:PFM:NREP 4 RP:PFM:REP 192->295|PF02589|1e-18|42.3|104/109|DUF162| RP:PFM:REP 387->461|PF11870|9e-05|32.0|75/92|DUF3390| RP:PFM:REP 502->558|PF02754|9e-08|38.6|57/63|CCG| RP:PFM:REP 632->689|PF02754|6e-07|32.8|58/63|CCG| HM:PFM:NREP 5 HM:PFM:REP 499->555|PF02754|1.2e-16|35.1|57/64|CCG| HM:PFM:REP 628->689|PF02754|5.7e-17|33.9|62/64|CCG| HM:PFM:REP 192->294|PF02589|2.7e-27|35.9|103/109|DUF162| HM:PFM:REP 314->326|PF00037|0.00027|61.5|13/24|Fer4| HM:PFM:REP 22->83|PF01968|0.00095|17.7|62/290|Hydantoinase_A| RP:SCP:NREP 4 RP:SCP:REP 8->126|1k77A|9e-04|23.7|118/260|c.1.15.5| RP:SCP:REP 289->396|1nekB1|8e-08|13.9|108/132|a.1.2.1| RP:SCP:REP 519->597|2aamA1|8e-05|16.5|79/285|c.1.8.15| RP:SCP:REP 613->667|2jovA1|6e-13|10.9|55/77|d.349.1.1| HM:SCP:REP 58->296|2g40A1|1.2e-40|44.7|170/0|c.124.1.7|1/1|NagB/RpiA/CoA transferase-like| HM:SCP:REP 228->385|1h7wA1|4.7e-21|22.4|147/182|a.1.2.2|1/1|alpha-helical ferredoxin| OP:NHOMO 1560 OP:NHOMOORG 604 OP:PATTERN 11---12222222223-1122326522121313221111111112111244431---1--11222--- 4451323-----2111-11-12--141111113222-344-3111-23-----2-22---1-222562321---------125121112222-222---113111645-6---------------111121-111154588---331111111111111111111121111-1-----1----33344---44466666446464644655444444645524-3------432-------------------2---22-------2222-2----212------------------------------------------------------------------------5--4-893732--A3-----1-234---1-----33211111111111111111-111-3313313331--11111121111114---11311113112222222233323234-----------------------------2--1-221112744947766646678666646797666622434131112113112242-21323333333223546-78163443445551A7A294623554522373--31333333333333333113112231--3-3--2422222-222222222222----2316------3-5331-4333434344-344444544434444244111131--5111111111111111111313333--111111111111-------------3-31-3333133111-3333-------11-3-1111133-111123-11----------111511111---33--------------112-11--11----------------------------------------------22- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 302 STR:RPRED 42.3 SQ:SECSTR ################################ccccHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEEEEcccccccccccEEEEEEEEEEEcTccHTTTccccccHHHHHHHHHHHHHHHHH##cGGGccEEEEEEEEcTTccHHHHTHHHHHHHHHHHTTccccccEEEEETTccEEEEETTcTTcGGGcEEEEEccTTcEEEEEEccccT###Tccccc################################################################TcTTcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHTcTTcTTcTTGGGTTccEEEEcTTcccHHHHHHHHHHHHHHHHHHGGGccccEEEEcccccTTccccEEcccccc####################################################################################################################################################################################################################################################################################################################### DISOP:02AL 1-5,8-8| PSIPRED cccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHHHccccEEEEEcHHHHHHccccHHHHHcccccEEccccHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccEEEEEcccccHHHHHHccccEEEEEEHHHHcccHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHcccHHHHHHHHHHHHHHHHHHcccccccccccHHccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccccccccccccccHHHHHcccccccccEEEEEEcccHHHHccHHHHHHHHHHHHHcccEEEEccccccccHHHHHcccHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccHHHHHHcccHHHHHHHHHHcccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHHccccccEEEHHHHHHHHcc //