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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49295.1
DDBJ      :             aspartyl-tRNA synthetase
Swiss-Prot:SYD_DESRM    RecName: Full=Aspartyl-tRNA synthetase;         EC=6.1.1.12;AltName: Full=Aspartate--tRNA ligase;         Short=AspRS;

Homologs  Archaea  68/68 : Bacteria  910/915 : Eukaryota  194/199 : Viruses  0/175   --->[See Alignment]
b.122.1b.40.4d.104.1
:600 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->591 1eqrA PDBj e-165 51.9 %
:RPS:PDB   11->591 1c0aA PDBj 2e-98 50.7 %
:RPS:SCOP  11->115 1c0aA1  b.40.4.1 * 9e-30 56.7 %
:RPS:SCOP  144->300 1nnhA  d.104.1.1 * 2e-49 24.8 %
:RPS:SCOP  326->483 1jhdA1  b.122.1.3 * 2e-42 14.0 %
:RPS:SCOP  483->571 11asA  d.104.1.1 * 1e-18 20.0 %
:HMM:SCOP  10->116 1c0aA1 b.40.4.1 * 2.6e-38 49.1 %
:HMM:SCOP  117->595 1g51A3 d.104.1.1 * 7.8e-117 39.0 %
:RPS:PFM   33->91 PF01336 * tRNA_anti 3e-08 50.0 %
:RPS:PFM   145->326 PF00152 * tRNA-synt_2 5e-50 54.0 %
:RPS:PFM   320->414 PF02938 * GAD 2e-22 51.6 %
:RPS:PFM   414->566 PF00152 * tRNA-synt_2 4e-34 50.3 %
:HMM:PFM   129->567 PF00152 * tRNA-synt_2 7.5e-135 64.2 313/323  
:HMM:PFM   27->111 PF01336 * tRNA_anti 5.1e-19 41.1 73/76  
:BLT:SWISS 1->600 SYD_DESRM 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49295.1 GT:GENE ABO49295.1 GT:PRODUCT aspartyl-tRNA synthetase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 809588..811390 GB:FROM 809588 GB:TO 811390 GB:DIRECTION + GB:PRODUCT aspartyl-tRNA synthetase GB:NOTE TIGRFAM: aspartyl-tRNA synthetase PFAM: GAD domain protein; tRNA synthetase, class II (D, K and N); nucleic acid binding, OB-fold, tRNA/helicase-type KEGG: chy:CHY_2204 aspartyl-tRNA synthetase GB:PROTEIN_ID ABO49295.1 GB:DB_XREF GI:134051324 InterPro:IPR002312 InterPro:IPR004115 InterPro:IPR004364 InterPro:IPR004365 InterPro:IPR004524 InterPro:IPR006195 LENGTH 600 SQ:AASEQ MSAESMNGLHRTLYCGELHKQHEGQEVTLMGWVQRRRDHGGLIFVDLRDRSGIVQVVFSPEVDQEAFKKAEGVRNEYVLAVVGRVNGRPEGTINPNMATGEVEVYAHTLRLLNRAKTPPFYIEDNIEVDENLRLRYRYLDLRRPEMHKAMMLRHRASKSIRDFLDQHGFLEIETPMLTKSTPEGARDYLVPSRVNPGKFYALPQSPQLFKQILMLAGMERYFQIVRCFRDEDLRADRQPEFTQIDLEMSFVEAEDVMGLMEQMIAEVCSDTIGVKISTPIPRLSYQEAMDRFGSDKPDTRFGLELKDITPIAAQCGFKVFNSTVAGGGQIKGINAKGCASFSRKEIDDLTAFVAVYKAKGLAYFIINEDGSVKSAIAKFFTEEEIAAIKDKMEAQPGDLLLFVADKPAVVAASLGALRVHLAERLELIPQGMWNFLWVTDFPLLEYDSEAGRFFAMHHPFTSPAEEDLPLLESNPGKVRARAYDMVLNGVEIGGGSIRIHRRDIQELMFKALGMSQEEAKEKFGFMLEAFEYGAPPHGGLAFGLDRLVMLLAGKDSIRDVIAFPKTASATCLMTQAPDVVDPAQLAELHIRSTAPVKKSN GT:EXON 1|1-600:0| SW:ID SYD_DESRM SW:DE RecName: Full=Aspartyl-tRNA synthetase; EC=6.1.1.12;AltName: Full=Aspartate--tRNA ligase; Short=AspRS; SW:GN Name=aspS; OrderedLocusNames=Dred_0757; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->600|SYD_DESRM|0.0|100.0|600/600| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 132->143|lrlryryldlrr| BL:PDB:NREP 1 BL:PDB:REP 11->591|1eqrA|e-165|51.9|576/590| RP:PDB:NREP 1 RP:PDB:REP 11->591|1c0aA|2e-98|50.7|576/585| RP:PFM:NREP 4 RP:PFM:REP 33->91|PF01336|3e-08|50.0|56/74|tRNA_anti| RP:PFM:REP 145->326|PF00152|5e-50|54.0|176/337|tRNA-synt_2| RP:PFM:REP 320->414|PF02938|2e-22|51.6|95/96|GAD| RP:PFM:REP 414->566|PF00152|4e-34|50.3|132/337|tRNA-synt_2| HM:PFM:NREP 2 HM:PFM:REP 129->567|PF00152|7.5e-135|64.2|313/323|tRNA-synt_2| HM:PFM:REP 27->111|PF01336|5.1e-19|41.1|73/76|tRNA_anti| GO:PFM:NREP 17 GO:PFM GO:0003676|"GO:nucleic acid binding"|PF01336|IPR004365| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF02938|IPR004115| GO:PFM GO:0005524|"GO:ATP binding"|PF02938|IPR004115| GO:PFM GO:0005737|"GO:cytoplasm"|PF02938|IPR004115| GO:PFM GO:0006412|"GO:translation"|PF02938|IPR004115| GO:PFM GO:0000166|"GO:nucleotide binding"|PF00152|IPR004364| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00152|IPR004364| GO:PFM GO:0005524|"GO:ATP binding"|PF00152|IPR004364| GO:PFM GO:0005737|"GO:cytoplasm"|PF00152|IPR004364| GO:PFM GO:0006412|"GO:translation"|PF00152|IPR004364| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00152|IPR004364| RP:SCP:NREP 4 RP:SCP:REP 11->115|1c0aA1|9e-30|56.7|104/106|b.40.4.1| RP:SCP:REP 144->300|1nnhA|2e-49|24.8|157/293|d.104.1.1| RP:SCP:REP 326->483|1jhdA1|2e-42|14.0|157/173|b.122.1.3| RP:SCP:REP 483->571|11asA|1e-18|20.0|85/328|d.104.1.1| HM:SCP:REP 10->116|1c0aA1|2.6e-38|49.1|106/0|b.40.4.1|1/1|Nucleic acid-binding proteins| HM:SCP:REP 117->595|1g51A3|7.8e-117|39.0|351/0|d.104.1.1|1/1|Class II aaRS and biotin synthetases|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g4432353682433265453 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 593 STR:RPRED 98.8 SQ:SECSTR ##HccHHHHHccccGGGccGGGTTcEEEEEEEEEEEEEccccEEEEEEETTEEEEEEEcGGcGHHHHHHHTTccTTcEEEEEEEEEEccTTTccTTcTTTTEEEEEEEEEEEEccccccccTTccccHHHHHHHHTHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHTTcEEcccccccccccccccccEEEccccTTcEEEcccccHHHHHHHHHTTccEEEEEEEEEccccccTTcccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccHccccEEEHHHHHHHHccccccTTccccEEEcHHHHTTcccHHHHHHHHTTEEEEEEEETTGGGccHHHHHHHHHHHHHTTcccccccGGGGGGGEEcTTGGGccHHHHHHHHHHTTccTTcEEEEEEEEHHHHHHHHHHHHHHHHHHTTccccccccEEEEEccccEEEEcccccEEEcccTTcccccccHHHHHHccTTccccEEEEEETTEEEEEEEEccccHHHHHHHHHHTTccHHHHHHHHHHHHHHTTTTcccEEEEEEEHHHHHHHHHTcccGGGGccccccTTcccTTTTccccccHHHHHHTTcccccc##### DISOP:02AL 1-7,570-581,593-593,595-601| PSIPRED ccHHHHHcccccccHHHccHHHcccEEEEEEEEEEEcccccEEEEEEEcccEEEEEEEEccccHHHHHHHHccccccEEEEEEEEEEcccccccccccccEEEEEEEEEEEEcccccccccccccccccHHHHccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccEEccccccccccEEEEEcccccEEEEcccHHHHHHHHHHcccccEEEEEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccHHHHHHHHHHcccHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHccccccEEEEEccccccccHHHHHccHHHHHHHHHHHcccccccHHHHcccHHHHHHHccHHHHHHHHHcccccHHccccccEEccccccccccccccEEEEcccccccccccHHHHHcccHHHHHHHHHHcccEEEccHHHHcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccEEEEcHHHHHHHHHccccHHHEEccccccccccccccccccccHHHHHHccccccccccccc //