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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49307.1
DDBJ      :             alanyl-tRNA synthetase
Swiss-Prot:SYA_DESRM    RecName: Full=Alanyl-tRNA synthetase;         EC=6.1.1.7;AltName: Full=Alanine--tRNA ligase;         Short=AlaRS;

Homologs  Archaea  68/68 : Bacteria  907/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
a.203.1b.43.3d.104.1d.206.1d.67.1
:878 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->464 1yfrA PDBj e-131 53.1 %
:BLT:PDB   565->717 1nyrB PDBj 3e-11 30.2 %
:BLT:PDB   785->875 3g98A PDBj 9e-06 31.1 %
:RPS:PDB   6->430 2cvsA PDBj 1e-65 12.0 %
:RPS:PDB   454->698 2e1bA PDBj 6e-46 26.7 %
:RPS:PDB   674->869 3c9iF PDBj 2e-18 12.4 %
:RPS:SCOP  2->241 1riqA2  d.104.1.1 * e-117 60.9 %
:RPS:SCOP  242->464 1riqA1  a.203.1.1 * 2e-61 41.5 %
:RPS:SCOP  454->553 2e1bA1  b.43.3.6 * 6e-13 28.2 %
:RPS:SCOP  554->719 1nyqA3  d.67.1.1 * 2e-38 24.4 %
:RPS:SCOP  772->828 1jrmA  d.206.1.1 * 2e-08 14.0 %
:HMM:SCOP  1->241 1riqA2 d.104.1.1 * 2.4e-98 63.2 %
:HMM:SCOP  242->464 1riqA1 a.203.1.1 * 8.7e-70 47.5 %
:HMM:SCOP  553->721 1nyrA3 d.67.1.1 * 8.2e-53 47.9 %
:RPS:PFM   6->557 PF01411 * tRNA-synt_2c e-177 55.2 %
:RPS:PFM   654->696 PF07973 * tRNA_SAD 1e-10 53.5 %
:RPS:PFM   705->794 PF12128 * DUF3584 5e-04 29.4 %
:RPS:PFM   826->867 PF02272 * DHHA1 8e-06 40.5 %
:HMM:PFM   6->556 PF01411 * tRNA-synt_2c 1.4e-214 52.8 545/551  
:HMM:PFM   654->697 PF07973 * tRNA_SAD 2.5e-20 61.4 44/44  
:HMM:PFM   802->869 PF02272 * DHHA1 2.4e-18 31.2 64/68  
:HMM:PFM   711->759 PF06156 * DUF972 0.00013 30.6 49/107  
:BLT:SWISS 1->878 SYA_DESRM 0.0 100.0 %
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49307.1 GT:GENE ABO49307.1 GT:PRODUCT alanyl-tRNA synthetase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 821755..824391 GB:FROM 821755 GB:TO 824391 GB:DIRECTION + GB:PRODUCT alanyl-tRNA synthetase GB:NOTE KEGG: chy:CHY_0538 alanyl-tRNA synthetase TIGRFAM: alanyl-tRNA synthetase PFAM: alanyl-tRNA synthetase, class IIc; phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD GB:PROTEIN_ID ABO49307.1 GB:DB_XREF GI:134051336 InterPro:IPR002318 InterPro:IPR003156 InterPro:IPR012947 LENGTH 878 SQ:AASEQ MLTGKEIREKYLRFFEQRGHQILPSASLIPHNDPSILWTAAGMVPFKPFFTGQAVPEYQRVTTCQKCIRTPDIESVGRTARHHTFFEMLGNFSFGDYFKESIIPWAWEFITKELNLPKEKLWITIYQDDDEAFEIWNKVVGIPSERIVRLGKDTNFWEIGVGPCGPCSEIYVDLGEARGCGSPECQVGCDCDRFLEIWNLVFIQFFRDEEGNYSPLENKGIDTGMGLERVASVLQGVASNFDTDIFREIMDFTANLAGQEYGQKADIDLALKVIADHCRAVTFAVSDGALPGNEGRGYVIRRLLRRAVRFGRVLGVREPFLYKVAQAVIKQMQDAYPELKQKAEHVLRVIRTEEERFLETLAAGSDILSALINEAKASGASEITGDDAFKLYDTFGFPLELTQEIAEEQGLAVDVEVFNAAMEEQRKRARSARQETEYLSERGVLYKALREELGETRFIGYSALEADSNIMALLKDGMQEISAVAGEEVEIVLDVTPCYAESGGQVADHAILRGPDLEVEITSVNKPVEGLVIHRGKVLSGIIKRHDSVKAIVDQPRRQDTARNHSATHLLHKALKEVLGDHVNQAGSLVEPDRLRFDFTHYAAVTSEELRRIEEIVNEAVLSNLSIEVFETSLSKAKEMGAAALFGEKYGKQVRVVKMGDFSMELCGGTHLTSTAEVGLFKIFNETSVGAGLRRIEAVTGTGVLKYLKAKEEQLEEIASVIKSPMHELVRRSEALVQQNKSLEQEIEALRNKLAKSEVQDILGNIKRAKEVPVLASVVAAPDMDNLRGMVDMLRDKMGSGVILLGSTAGEKVNLVAAVTKDLHGQGLHAGNLVKEIAKMVGGGGGGRPDMAQAGGKNPEKLQEAIDQVCRVVEGQIK GT:EXON 1|1-878:0| SW:ID SYA_DESRM SW:DE RecName: Full=Alanyl-tRNA synthetase; EC=6.1.1.7;AltName: Full=Alanine--tRNA ligase; Short=AlaRS; SW:GN Name=alaS; OrderedLocusNames=Dred_0769; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->878|SYA_DESRM|0.0|100.0|878/878| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| COIL:NAA 35 COIL:NSEG 1 COIL:REGION 726->760| SEG 301->317|rrllrravrfgrvlgvr| SEG 842->847|gggggg| BL:PDB:NREP 3 BL:PDB:REP 2->464|1yfrA|e-131|53.1|441/448| BL:PDB:REP 565->717|1nyrB|3e-11|30.2|149/637| BL:PDB:REP 785->875|3g98A|9e-06|31.1|90/111| RP:PDB:NREP 3 RP:PDB:REP 6->430|2cvsA|1e-65|12.0|417/657| RP:PDB:REP 454->698|2e1bA|6e-46|26.7|210/216| RP:PDB:REP 674->869|3c9iF|2e-18|12.4|193/221| RP:PFM:NREP 4 RP:PFM:REP 6->557|PF01411|e-177|55.2|545/546|tRNA-synt_2c| RP:PFM:REP 654->696|PF07973|1e-10|53.5|43/44|tRNA_SAD| RP:PFM:REP 705->794|PF12128|5e-04|29.4|85/1179|DUF3584| RP:PFM:REP 826->867|PF02272|8e-06|40.5|42/67|DHHA1| HM:PFM:NREP 4 HM:PFM:REP 6->556|PF01411|1.4e-214|52.8|545/551|tRNA-synt_2c| HM:PFM:REP 654->697|PF07973|2.5e-20|61.4|44/44|tRNA_SAD| HM:PFM:REP 802->869|PF02272|2.4e-18|31.2|64/68|DHHA1| HM:PFM:REP 711->759|PF06156|0.00013|30.6|49/107|DUF972| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF01411|IPR018164| GO:PFM GO:0004813|"GO:alanine-tRNA ligase activity"|PF01411|IPR018164| GO:PFM GO:0005524|"GO:ATP binding"|PF01411|IPR018164| GO:PFM GO:0005737|"GO:cytoplasm"|PF01411|IPR018164| GO:PFM GO:0006412|"GO:translation"|PF01411|IPR018164| GO:PFM GO:0006419|"GO:alanyl-tRNA aminoacylation"|PF01411|IPR018164| GO:PFM GO:0005524|"GO:ATP binding"|PF07973|IPR012947| GO:PFM GO:0005737|"GO:cytoplasm"|PF07973|IPR012947| GO:PFM GO:0006412|"GO:translation"|PF07973|IPR012947| GO:PFM GO:0016876|"GO:ligase activity, forming aminoacyl-tRNA and related compounds"|PF07973|IPR012947| GO:PFM GO:0043039|"GO:tRNA aminoacylation"|PF07973|IPR012947| GO:PFM GO:0003676|"GO:nucleic acid binding"|PF02272|IPR003156| RP:SCP:NREP 5 RP:SCP:REP 2->241|1riqA2|e-117|60.9|230/236|d.104.1.1| RP:SCP:REP 242->464|1riqA1|2e-61|41.5|212/212|a.203.1.1| RP:SCP:REP 454->553|2e1bA1|6e-13|28.2|85/87|b.43.3.6| RP:SCP:REP 554->719|1nyqA3|2e-38|24.4|164/179|d.67.1.1| RP:SCP:REP 772->828|1jrmA|2e-08|14.0|57/104|d.206.1.1| HM:SCP:REP 1->241|1riqA2|2.4e-98|63.2|228/0|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 242->464|1riqA1|8.7e-70|47.5|221/0|a.203.1.1|1/1|Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS)| HM:SCP:REP 553->721|1nyrA3|8.2e-53|47.9|167/179|d.67.1.1|1/1|ThrRS/AlaRS common domain| OP:NHOMO 1471 OP:NHOMOORG 1170 OP:PATTERN 11111111111111111211112121112211111111111111111122222123233332112111 2221111111111111111-1111111111111111111111111111111111111111111111112211-111111111111111211111111-111111111121111111111111111111111111111111111122111111111111111111112111111111111111111211221111333332232222332112211222111211211111121111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122221111111212121112222111111211111221111111212211111111111111112211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1112111111111111111111111111111111111121111111112121111111112111111111111111111111111111111111111111111111111111112111111111111111111111111111111111111111111111111111111111111111111-111111111111111111111-111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111112222222222111 1111241-31111111121-111111211111111111111111111111212222111111122111-3212122211221111211-12111111111111223123134632632221322242628L313232222321221222142223322122232432322322222222I2221322441212224222 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 868 STR:RPRED 98.9 SQ:SECSTR #ccHcHHHHHHHHHHHTcccEEEEcTTcccTTccccccccccHHHHHHHHHHHEEEEcTTcTTHHHHHTTTcccccccccccccEEEccEEEEcHHHHHHHHTTcEEEEcGGccHHHHHHHHHHHHHTEEEHHHHHHHHHHHHHHHccHHHHTcTTTTTccccccTTccccccccTTccccccccccEEcHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccEEEEEcHHHHHHHTTccTTcHHHHHHHHHHHHHHHHHHHHHHcccTTcTTcGGGGTccTGGGGTccccccccHHHHHHHHHHHcccccccccccccTTHHHHTTcccccccccccEEccHHHHHcEEcHHHHHHHHHTTcccHHHHHHHHHTTTcTcTTccHHHHHHTccTTcccHHHHHHHHHHHHTTcccEEcccccHHHHHHHHcc####cccTcTccccccccTcGccccccTTccTTccEEEEEEETTEEEEEcccccccccccccccccccccTTcccccEEETTcccEEEEEEEEcccTTcccEEEEccGGGccccccEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHTTccEEEEccccccEEEEEEEccccGGHGGHHHHHHHHHHHHHHcccEEEEEccccccEEEEEEEEEEEHcTTccEEEEETTccEEcccccccccGGGTccEEEEEEEEEETTEEEEEETHHHHHHHHHHcccccEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHH#HHHHHHHHHHHHHHHHHHHHHHH#HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEETTEEEEcccccccccccccccccccccTTHHHHHHHHHHHHHHHc### DISOP:02AL 1-2,374-380,424-439| PSIPRED cccHHHHHHHHHHHHHHcccEEcccccccccccccEEEEEccccccccEEccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccHHHEEEEEEcccHHHHHHHHHHccccHHHEEEccccccccccccccccccEEEEEEccccccccccccccccccccEEEEEEEEEEEccccccccEEEcccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHcccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccccHHHHHccHHHHHHcccccccccccEEEEEEEEEEEEEEccEEEEEEEcccEEEEEEcccccccccccccccEEEEEEccEEEEEEEEEEccccEEEEEEEEcccccccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccEEEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHccccccccccccccEEEEEEccEEEccccccccccHHHcccEEEEEEEcccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEccEEEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEEccccEEEEEEEccHHHHHccccHHHHHHHHHHHHccccccccHHcccccccHHHHHHHHHHHHHHHHHHcc //