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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49341.1
DDBJ      :             type II secretion system protein E
Swiss-Prot:             

Homologs  Archaea  63/68 : Bacteria  367/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:436 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   97->362 2gzaA PDBj 3e-16 30.6 %
:RPS:PDB   199->270 3czpA PDBj 4e-05 13.9 %
:RPS:PDB   255->403 1dmaB PDBj 5e-13 12.6 %
:RPS:SCOP  107->336 1p9rA  c.37.1.11 * 1e-16 21.6 %
:HMM:SCOP  67->384 1g6oA_ c.37.1.11 * 1.1e-32 20.6 %
:RPS:PFM   103->372 PF00437 * GSPII_E 5e-18 28.5 %
:HMM:PFM   92->372 PF00437 * GSPII_E 9.6e-40 28.2 266/282  
:BLT:SWISS 79->337 Y900_METJA 1e-18 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49341.1 GT:GENE ABO49341.1 GT:PRODUCT type II secretion system protein E GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 863368..864678 GB:FROM 863368 GB:TO 864678 GB:DIRECTION + GB:PRODUCT type II secretion system protein E GB:NOTE PFAM: type II secretion system protein E KEGG: art:Arth_2933 type II secretion system protein E GB:PROTEIN_ID ABO49341.1 GB:DB_XREF GI:134051370 InterPro:IPR001482 LENGTH 436 SQ:AASEQ MQKDQFKGLQGISPLLRQRQDQQLEEIIYSRFGELVMECRAHALTIFQKNKGEKIDGNYLESELNNLLSKKYGNIGLSERENIARMVKNEMLGYGVLQDLIDDPLISDIYVIRYNRVRYKRDGKLYVAKNVRFRDEQHLRQFIDLLCYIGKRKVDESNPTVSLTTPEGHRVAITLGTIADGFSTMSIRKFLFTGNIDGLVKNGTFSKRAAEFIRRCVKGRRNIVIVGPQNTGKTTLIAVLGHEFDENELPVLVEEVRECTIEHPDLRVFVARQANMEGKGEYGFKRILKDSLQSGGTRVLVAEVRDGSVYYMLTAMAMGQQGSMGTFHADSPQDAIQIRLVLMLSQAPECAGMTIESMYRIIGAAVHTVIMLNLDENGRRICSHISEVLKSTGEPPEVIDIFERRNGELVYTGNYPIRAAEEMKQYGVDFKGVIEN GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 79->337|Y900_METJA|1e-18|28.6|255/551| SEG 15->24|llrqrqdqql| SEG 60->71|leselnnllskk| BL:PDB:NREP 1 BL:PDB:REP 97->362|2gzaA|3e-16|30.6|252/324| RP:PDB:NREP 2 RP:PDB:REP 199->270|3czpA|4e-05|13.9|72/460| RP:PDB:REP 255->403|1dmaB|5e-13|12.6|143/189| RP:PFM:NREP 1 RP:PFM:REP 103->372|PF00437|5e-18|28.5|256/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 92->372|PF00437|9.6e-40|28.2|266/282|GSPII_E| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 1 RP:SCP:REP 107->336|1p9rA|1e-16|21.6|213/378|c.37.1.11| HM:SCP:REP 67->384|1g6oA_|1.1e-32|20.6|311/323|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 798 OP:NHOMOORG 432 OP:PATTERN 2221123344444433221111142113-3521113222222552224-322312222222-21-21- 4-415111111111-1111-11--111111111111111121343212222-45422222226111133221------1141-------------------------------------------11---1121--32254---21--------------------------------------------14---1-11-1--111-1-----------------------22------------------------------------------------------------------------------------------1-11------1--1-2-------1-2--212----141--1-21212-----33224-3112-12132123211111111111113-111113125531444563554543-112111-1211111--------163--1--111-1---1---11111111111111--1-2232-133134333351-22233623333333452342--54211-11133232-1--111----------112--3---21-1-11111-2-2----1121112111----1--2--1--------------2311-----1---1------1----1-11-12----1---------1-1--1-----------------1-----1--------121--------1------------1-------111211111111---------1112-1-11111-111-------1----------1-11111111----1-111---------11323-----223332211-11------1----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 79.4 SQ:SECSTR #########################################################################################TTTccGGGHHHHccTTEEEEEEccTTEEEEEETTEEEEcTTcccccHHHHHHHHHHHHHHTTccccccccEEEEEcTTccEEEEEcTTTccTccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcGGGEEEEEccccccccTTccTccHHHHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHccccccccTTcTTccEEEccHHHTTccccccEEEEHEEEEETTcGGGTcEEEccccTTcHHHHHHHHHHHTccccccccHHcEEEEccccccccEEEEcHHHHHHHHHHHHHHHHTTccHHHHGGGccccccc# DISOP:02AL 1-1,275-275,436-437| PSIPRED cccccEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccHHHHccccccEEEEEccccEEEEEccEEEEEEccccccHHHHHHHHHHHHHHccccccccccEEEEEEccccEEEEEEcccccccEEEEEEEccccccHHHHHHHccccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHccccccEEEEEcccEEEcccccEEEEEEEcccccccccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEEEEEcccEEEcccccHHHHHHHHHHcccccccccc //