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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49363.1
DDBJ      :             type II secretion system protein E
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  183/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:481 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   124->340 2oap1 PDBj 5e-06 23.8 %
:RPS:PDB   279->441 1dmaB PDBj 3e-05 9.5 %
:RPS:SCOP  250->374 1p9rA  c.37.1.11 * 6e-09 25.6 %
:HMM:SCOP  111->439 1p9rA_ c.37.1.11 * 3.7e-14 19.4 %
:RPS:PFM   140->371 PF00437 * GSPII_E 3e-13 28.8 %
:HMM:PFM   129->406 PF00437 * GSPII_E 9.9e-23 21.9 265/282  
:BLT:SWISS 6->100 PIBF1_HUMAN 3e-04 28.1 %
:BLT:SWISS 131->404 VIRBB_AGRT5 8e-09 24.6 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49363.1 GT:GENE ABO49363.1 GT:PRODUCT type II secretion system protein E GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 883169..884614 GB:FROM 883169 GB:TO 884614 GB:DIRECTION + GB:PRODUCT type II secretion system protein E GB:NOTE KEGG: mta:Moth_0335 type II secretion system protein E GB:PROTEIN_ID ABO49363.1 GB:DB_XREF GI:134051392 InterPro:IPR001482 LENGTH 481 SQ:AASEQ MLKAIKGKFQKVNYEVQQHQTEQLDPKVKTEQIISKLHSIKDGYIVEQIGEKSFEQTKDIVLNLLSETTILTQNDIEHINELEKKSMVACAHSALQLKKIIFGLMQRFGITVRDMTIQEVVDQIFNEKWGLGSVQELYSDPEVDEVEIIGPDNVFSIRKGKYCKEAIKLKPEELDAMVIKLLRESADLTTRRPFIRTARKDKTRVFITGDPLTKQITITLRKKDTFLYTKERLESNGTMDAKTYDLMALIFKWLLNVLISGPVNSGKTTQLVHFFQYREPELRTVVLEPKLEMMLFETYPGRNIIQLEEQPQLGINLKTMFNDVTLQISPVSVIIGEILGGNEIREAVKGGVRGQKGNLSTFHSKKIIDALYNMALIYIEETDSKSITMDVAMRRVVQAYDVIIQLDTMPRTGQKKIVHIAAPYLEDGEIKLHDIVTWHPESEDDYFIGSWQHHSLPKWIVEEMFRNGLSKAKLREAGYSW GT:EXON 1|1-481:0| BL:SWS:NREP 2 BL:SWS:REP 6->100|PIBF1_HUMAN|3e-04|28.1|89/757| BL:SWS:REP 131->404|VIRBB_AGRT5|8e-09|24.6|268/344| BL:PDB:NREP 1 BL:PDB:REP 124->340|2oap1|5e-06|23.8|210/481| RP:PDB:NREP 1 RP:PDB:REP 279->441|1dmaB|3e-05|9.5|148/189| RP:PFM:NREP 1 RP:PFM:REP 140->371|PF00437|3e-13|28.8|222/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 129->406|PF00437|9.9e-23|21.9|265/282|GSPII_E| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 1 RP:SCP:REP 250->374|1p9rA|6e-09|25.6|117/378|c.37.1.11| HM:SCP:REP 111->439|1p9rA_|3.7e-14|19.4|314/401|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 260 OP:NHOMOORG 204 OP:PATTERN 11----12---------2-----1------1--111-----------1--111-221112--1----- --4-3-----------------------------------1-111-11112-243-1-11--2----1211-------1-2-------------------------------------------------------22242----1------------------------------------------11-1------1-1--111-1-----------------------22------------------------------------------------------------------------------------------1---------1--1-3-------1-2--112-----4---1-112-1-----3----------1111--------------------11-111111111----2-111221----1------------------111-----------------------------------1121------1----21-111---11111122-11111--211----11-2-11----1-----------------1---1--1-11111-1-1----111---1-1-----1--------------------1111-----1------1---1----1-11-1-----------------1------------------------------------11-----------------------------111111111111--------------1-11111-111-------1-------------11-1-------1-111---------11222-----1-233------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 316 STR:RPRED 65.7 SQ:SECSTR ###########################################################################################################################HHHTTTccGGGHHH#HcTTEEEEEEccTTcccEEEETTTEEEcccccHHHHHHHHHHHHHTTccccTTccEEEEEETTTEEEEEEcccccTTcEEEEEEcccccccHHHHHHTTcccHHHHHHHHHHHHTTccEHHHccHHHHHHHHHHHHHHHHccccccccTTcccTccHccccEEHHHHHHHHHHHTTTEEEEEEHEEEEHHHHHHHHHHcccccccccTTccEEEccccHHHHTTccccccEEEEEEEEETTcGHHTccTGGEEEccccTTcHHHHHHHHHHHTccccccccEEE#EccccccccEEEEcHHHH######################################## DISOP:02AL 1-4,478-478,480-482| PSIPRED ccHHccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccHHHHccccccEEEEEcccEEEEEEccEEEEccccccHHHHHHHHHHHHHHccccccccccEEEEccccEEEEEEEccccccEEEEEEEcccccccHHHHHHcccccHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHccccccEEEEEccccccccccccccEEEEEEccccccccHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEEEccccEEEEEEEcccccHHHHHHHHHHHcccHHHHHcccccc //