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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49422.1
DDBJ      :             transcriptional regulator, XRE family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  16/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:218 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->64 1b0nA PDBj 7e-08 38.7 %
:RPS:PDB   1->64 3clcA PDBj 2e-13 28.1 %
:RPS:SCOP  1->62 1y7yA1  a.35.1.3 * 3e-13 33.9 %
:HMM:SCOP  1->73 1y9qA1 a.35.1.8 * 6.1e-15 32.9 %
:RPS:PFM   7->60 PF01381 * HTH_3 3e-06 37.0 %
:HMM:PFM   7->61 PF01381 * HTH_3 4.7e-15 36.4 55/55  
:BLT:SWISS 2->105 Y474_MYCTU 4e-09 30.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49422.1 GT:GENE ABO49422.1 GT:PRODUCT transcriptional regulator, XRE family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(945674..946330) GB:FROM 945674 GB:TO 946330 GB:DIRECTION - GB:PRODUCT transcriptional regulator, XRE family GB:NOTE PFAM: helix-turn-helix domain protein KEGG: mta:Moth_0284 transcriptional regulator, XRE family GB:PROTEIN_ID ABO49422.1 GB:DB_XREF GI:134051451 InterPro:IPR001387 LENGTH 218 SQ:AASEQ MDIGSRIKKLRTYQGLSMNELSRRSGVAQSHLSYVESGQRQPTFDVIERICSGLGLSVAEFFNEGFMPSPYSSDINSLVNEVQNLKPSQVSLIKNIATEFSLTNEELELAAKKSLSTIANRESASGVLHIDLLDVFGRKDTVLSAAGVPLSLEDRIEILELIKEKLPADEDLDYENNEVIAASYQGNRFAHIPTQEEVEDIELAFKLAEQQKNRKHKK GT:EXON 1|1-218:0| BL:SWS:NREP 1 BL:SWS:REP 2->105|Y474_MYCTU|4e-09|30.8|104/140| BL:PDB:NREP 1 BL:PDB:REP 3->64|1b0nA|7e-08|38.7|62/103| RP:PDB:NREP 1 RP:PDB:REP 1->64|3clcA|2e-13|28.1|64/76| RP:PFM:NREP 1 RP:PFM:REP 7->60|PF01381|3e-06|37.0|54/55|HTH_3| HM:PFM:NREP 1 HM:PFM:REP 7->61|PF01381|4.7e-15|36.4|55/55|HTH_3| GO:PFM:NREP 1 GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF01381|IPR001387| RP:SCP:NREP 1 RP:SCP:REP 1->62|1y7yA1|3e-13|33.9|62/69|a.35.1.3| HM:SCP:REP 1->73|1y9qA1|6.1e-15|32.9|73/0|a.35.1.8|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 25 OP:NHOMOORG 16 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2----------------32-------------1--16-----1---1-----------------------------------------------------11-------1---------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------1-----------1-------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 100 STR:RPRED 45.9 SQ:SECSTR HHHHHHHHHHHHHTTccHHHHHHHHTccHHHHHHHHTTcccccHHHHHHHHHHHTccHHHHHHHHTTcccTHHHHHHHHHHHccccHHHHHHHHHHHHHH###################################################################################################################### DISOP:02AL 106-114,208-219| PSIPRED ccHHHHHHHHHHHcccHHHHHHHHHcccHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccHHHHHHcccccHHHHHHHHHHcEEEEEEHHHHccHHHEEEEccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcc //