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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49502.1
DDBJ      :             phage integrase family protein
Swiss-Prot:             

Homologs  Archaea  47/68 : Bacteria  817/915 : Eukaryota  1/199 : Viruses  3/175   --->[See Alignment]
a.60.9d.163.1
:324 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   44->313 1a0pA PDBj 2e-24 34.7 %
:RPS:PDB   52->312 2a3vA PDBj 2e-35 24.5 %
:RPS:SCOP  52->320 1p7dA  d.163.1.1 * 2e-26 14.7 %
:HMM:SCOP  47->137 1a0pA1 a.60.9.1 * 3.3e-10 31.9 %
:HMM:SCOP  143->322 4crxA2 d.163.1.1 * 1.4e-45 39.4 %
:RPS:PFM   63->124 PF02899 * Phage_integr_N 1e-06 37.1 %
:RPS:PFM   154->310 PF00589 * Phage_integrase 7e-23 40.6 %
:HMM:PFM   148->312 PF00589 * Phage_integrase 2.8e-40 35.6 163/173  
:HMM:PFM   62->126 PF02899 * Phage_integr_N 5.6e-12 32.3 65/84  
:BLT:SWISS 65->321 XERC_LISW6 1e-41 37.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49502.1 GT:GENE ABO49502.1 GT:PRODUCT phage integrase family protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1022221..1023195 GB:FROM 1022221 GB:TO 1023195 GB:DIRECTION + GB:PRODUCT phage integrase family protein GB:NOTE PFAM: phage integrase family protein; phage integrase domain protein SAM domain protein KEGG: dsy:DSY2171 hypothetical protein GB:PROTEIN_ID ABO49502.1 GB:DB_XREF GI:134051531 InterPro:IPR002104 InterPro:IPR004107 LENGTH 324 SQ:AASEQ MLNYLVDQILGICGTNAEGQDDVEKQLRELLNGYVIKKASPDSNLADANQKLNMFLLSKKMEGLSEKTIDKYRKTILDFAKYVNKPLKRITTADIRTWLSNRDIKISTVRYRLAVLRSFYNYLLAEEIVAVDPTRRIKSPKLEKRIPKALNNDELEVLREGCNTLREKALLEIFYATGCRIGEVFGANKIDINWQERSLVVLGKGNKERIVFIGARAAHSLKKYLNSRQDNEDALFVTEKGKIQRLSVRSIQLIFKKIANRVVIHKNIYPHIFRHTLATALLNHGARLEDVQDLLGHTNPSTTQIYCKVSPERKKLAYNQHFVN GT:EXON 1|1-324:0| BL:SWS:NREP 1 BL:SWS:REP 65->321|XERC_LISW6|1e-41|37.3|255/300| BL:PDB:NREP 1 BL:PDB:REP 44->313|1a0pA|2e-24|34.7|251/271| RP:PDB:NREP 1 RP:PDB:REP 52->312|2a3vA|2e-35|24.5|257/313| RP:PFM:NREP 2 RP:PFM:REP 63->124|PF02899|1e-06|37.1|62/84|Phage_integr_N| RP:PFM:REP 154->310|PF00589|7e-23|40.6|155/168|Phage_integrase| HM:PFM:NREP 2 HM:PFM:REP 148->312|PF00589|2.8e-40|35.6|163/173|Phage_integrase| HM:PFM:REP 62->126|PF02899|5.6e-12|32.3|65/84|Phage_integr_N| GO:PFM:NREP 5 GO:PFM GO:0003677|"GO:DNA binding"|PF02899|IPR004107| GO:PFM GO:0015074|"GO:DNA integration"|PF02899|IPR004107| GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 1 RP:SCP:REP 52->320|1p7dA|2e-26|14.7|265/280|d.163.1.1| HM:SCP:REP 47->137|1a0pA1|3.3e-10|31.9|91/0|a.60.9.1|1/1|lambda integrase-like, N-terminal domain| HM:SCP:REP 143->322|4crxA2|1.4e-45|39.4|180/212|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 2190 OP:NHOMOORG 868 OP:PATTERN 11111111111111112------------1--111111-637211111-25-1-11111112111--- 33E1422222222222322-23223322222283254413227412212211423232221262333-2-32222265332211-111453323222--529393322222222222222222222222222224213311246428182-1-11--------3--2429--------------211223233234344234235533633332223485692432222324234724222224442223622322233213232233333422222241111---1--21123222222111111111111111111-211137443432353446333332332233132185643A93515422225313229922222222222223222323222222222222-322233212D22222422DA223421222921-1--322333333338222232222222222222222222222222222222-223422111722222222222335E22222223322B4222232331213633122622222-2222222224B322263-2252452323222222333222222332211111111--1-1111113122265232241-23232247332222242623322--24232------23443322223222222-222232223222222222223282AD32222232222222223522222222-222222222322--12-------1-222222322222222122222223222222222342232322222255722222222222225222222223322222222222222--32442333--------223------1--1--------1---2211111112111262 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------- ---------------1-----------------------------------------------------------------------1----------1---------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 85.8 SQ:SECSTR ###########################################HHHHHcHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTccccGGGccHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTcccccGGccTTcccccccccccccccccHHHHHHHTTcccHHHHHHHHHHHHHccccHHHHHTccGGGEETTTTEEEEEETTTEEEEEEccGGGHHHHHHHHHHHHHGGcccccccccEEccccHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHHTTccHHHHHHHHTcccHHHHGGGcccccccccHHHHHG### PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHcccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHcccHHHHHcccHHHccccccEEEEEcccccEEEEEccHHHHHHHHHHHHHcccccccEEEccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHccc //