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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49511.1
DDBJ      :             TRAG family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  74/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:912 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   208->282 1gl7G PDBj 5e-05 32.4 %
:RPS:PDB   221->644 1e9rB PDBj 2e-28 16.8 %
:RPS:SCOP  489->644 1e9rA  c.37.1.11 * 8e-22 17.4 %
:HMM:SCOP  159->645 1e9rA_ c.37.1.11 * 9.4e-40 24.8 %
:RPS:PFM   206->634 PF02534 * TraG 8e-41 33.3 %
:HMM:PFM   234->643 PF02534 * TraG 2.7e-47 24.6 395/469  
:BLT:SWISS 236->759 VIRD4_AGRT5 2e-11 24.8 %
:BLT:SWISS 759->874 ZMYM2_MOUSE 2e-04 25.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49511.1 GT:GENE ABO49511.1 GT:PRODUCT TRAG family protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1031799..1034537 GB:FROM 1031799 GB:TO 1034537 GB:DIRECTION + GB:PRODUCT TRAG family protein GB:NOTE PFAM: TRAG family protein KEGG: mta:Moth_0365 TraG protein GB:PROTEIN_ID ABO49511.1 GB:DB_XREF GI:134051540 InterPro:IPR003688 LENGTH 912 SQ:AASEQ MLQQVGNKSVELLNRGSELIINRIPEGRFRDWVNNHQKIALGLASLPIVVPVGYILDVSSIGRMAGWIYDIGVQLQGVSIFSTPEQKAAAAQCIKMGSYISNHTGAVTQAWLTGSYEPGMPVKELETIKEWWQWGNLALMATIPWVWWNFQWGLPKHSSTRVHGLRVVDNAAFGTNRWAGVKDLKNFCELGPPVHLKKNKDNIIKFPGGNLIGELERKIIRVNFEKVPDDTPKTAPHLLAYGGTGAGKSYSLVSGNIISGVSDGQSLVLIDPKGELFKTFAKWLNAMGYENVWALNFMTPQHSHRWNSVIECQDDAEISEMVDTLSINTVGPNPSYFQLKAMELMEAIIGLLKGDFPVEQQHMRAINTLAAWPLEKLDARFKEAYQAERISATIYERWRGVAKENYGYAVSNLTAVLKNLTTSPLAALMSEKEIDLSEIGRKKTALFLIIPTGGEGVYLKPILSMFYKFLFKRLDKLAFTSPGERLPVPVRNVWDEMANVGVIPGLPEIISTARSKGIHIMMILQTPTQLESLYGRDDAKTITGNCPTVMMIGIAPADRDLAKMFSEILGTAAVEAYKVSEDRTVPGKHWFEFSKKTKTVIERPLMTMSEIFKIDPRYCIALLQWSNPVYLKKVGWTKLPQAKDIRRCGMLPIKEYIPARSFDISLPGDDILSSNNEELSLAFINQDEQEIPSQKVELSKVPGTKPEKEFISTKGEKIISLGSFLNNWEKAPPDNKQINGDTPTAVTNEIEVTAPGAAPPTASEQISGDIVEITWNENKQEEMIQEDPLNPPDENELVMYQGDFTDVIPEDLSEQLLENTGGAFFIPDISENQPEDQFLGGGEEEVSAGDLPINTGENSVTSEPMTQDEFIALTGAALEHSRENLTGEIVNELPVEDEISVPANAKSINCSW GT:EXON 1|1-912:0| BL:SWS:NREP 2 BL:SWS:REP 236->759|VIRD4_AGRT5|2e-11|24.8|467/668| BL:SWS:REP 759->874|ZMYM2_MOUSE|2e-04|25.0|116/1376| TM:NTM 2 TM:REGION 37->59| TM:REGION 61->82| BL:PDB:NREP 1 BL:PDB:REP 208->282|1gl7G|5e-05|32.4|74/412| RP:PDB:NREP 1 RP:PDB:REP 221->644|1e9rB|2e-28|16.8|380/422| RP:PFM:NREP 1 RP:PFM:REP 206->634|PF02534|8e-41|33.3|403/431|TraG| HM:PFM:NREP 1 HM:PFM:REP 234->643|PF02534|2.7e-47|24.6|395/469|TraG| GO:PFM:NREP 2 GO:PFM GO:0009291|"GO:unidirectional conjugation"|PF02534|IPR003688| GO:PFM GO:0016020|"GO:membrane"|PF02534|IPR003688| RP:SCP:NREP 1 RP:SCP:REP 489->644|1e9rA|8e-22|17.4|138/420|c.37.1.11| HM:SCP:REP 159->645|1e9rA_|9.4e-40|24.8|399/433|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 98 OP:NHOMOORG 74 OP:PATTERN -------------------------------------------------------------------- ----1----------------------------------------------1----------------------------32------------------------------------------------------------------------------------1--1--------------1-----------------------------------1---------------------1----------1-1-11------1------------1--2----------11111--1--------11----11---2-1-1-11-1-11-2111-2322-------11--311--521----1-112------1--1---------1--1--------------------------2--11122-----2------2---1--11------------------------------------------------------------------------------------------------1-------------------------------------------1---------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------1------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 593 STR:RPRED 65.0 SQ:SECSTR #############################################cccEETccEEEcHHHHHHHHGGGHHHHTcTTcEEEEEEccGGGGHHHHHHHHHHHHTTTccEEEEEccccccccHEEETTEEHHHHHHHTcccccccccEEEEEcccccHHHcTTcHHH####HHHHHccccHHHHHHHHHHHHHEccEEEHHHHHHHHcccccccEETHHHHHHccEETTEEccGGGGGGcEEEEccTTccHHHHHHHHHHHHHHHTTcEEEEEEETTHHHHHHccccTcEEEcTTcEEEcTTcTTcccccGGGGcccTTHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHTccHHHHHHHHTTcTTTTcccHHHTTcccHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccccHHHHHHcTTcccEEEEEcGGGHHHHHHHHHHHHHHHHHHGGGccccTTcccTTccEEEEEccGGGccccccHHHHHHHcTTTTEEEEEEEccHHHHHHHHcHHHHHHHHTTccEEEEccccTTcHHHHHHHHHHHcEEEEEEEcccEEEEE##EEEEEEcccEEEEEEEEcccHHHHHTccccEEEEEccccccEEEEEccccccccccc############################################################################################################################################################################################################################################################################ DISOP:02AL 1-7,481-481,574-605,646-657,685-714,727-743,780-793,839-864| PSIPRED cccccccHHHHHHHcccHHHEHcccccHHHHHHccccEEEEcccccccEEccHHHEEHHHHHHHHHHHEEccEEEEEEEEEcccHHHHHHHHHHHHccccccccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHcccccccccccccHHHHHHHHHcccccccHHHccccccccccEEEEEEcccEEEEccccccccccccccEEEEEEccccccHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHccccEEEEEcccccccccEEcHHHHcccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHccHHHHHHHccccccHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEcHHHcccHHHHHHHHHHHHHccEEEEEEEccHHHHHHHHcHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHHccEEEEEEEEEEEccccccccccccEEEEEEEEEEcccHHHHHHccccEEEEEEcccccEEEEcccHHHcHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccccHHHccccccccccccccccccccccEEEEEccHHHHHHHHHcHHHHHHHcccccccccccccccccccc //