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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49542.1
DDBJ      :             CRISPR-associated protein Cas1
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  166/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->330 2yzsB PDBj 8e-14 25.1 %
:RPS:PFM   8->332 PF01867 * Cas_Cas1 1e-58 42.6 %
:HMM:PFM   8->333 PF01867 * Cas_Cas1 2e-101 44.6 312/316  
:BLT:SWISS 44->341 Y378_METJA 6e-24 29.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49542.1 GT:GENE ABO49542.1 GT:PRODUCT CRISPR-associated protein Cas1 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1078392..1079423 GB:FROM 1078392 GB:TO 1079423 GB:DIRECTION + GB:PRODUCT CRISPR-associated protein Cas1 GB:NOTE TIGRFAM: CRISPR-associated protein Cas1 PFAM: protein of unknown function DUF48 KEGG: swo:Swol_0480 hypothetical protein GB:PROTEIN_ID ABO49542.1 GB:DB_XREF GI:134051571 InterPro:IPR002729 LENGTH 343 SQ:AASEQ MRKMLNVLYITNPEAYLAKDGENLVVRVQDEEIFRTPIHYLEGIVTFGYMGASPALLGMCVEKGVTVSFLTAHGKHQATVHGTPKGNVLLRRKQYRLADSESESAKLASMFIIGKIANCRTVLRRFMSDYGDKVQIEEVDRVSKIMARNVLRLGKELLLDEVRGIEGESAQMYFSVFDQLIICHKDHFFMKGRNRRPPLDNMNALLSFLYSLLLHETRSALETVGLDPYVGFLHRDRPGRTGLALDLMEEFRPYLVDRLALSLINRRQVTGDGFLKKESGGVIMKENVRKIVIEAWQKRKREEITHPFLEKKIYVGLLPYAQALLLARHLRGDLDRYPPFVWK GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 44->341|Y378_METJA|6e-24|29.2|277/100| SEG 205->214|llsflyslll| BL:PDB:NREP 1 BL:PDB:REP 8->330|2yzsB|8e-14|25.1|291/307| RP:PFM:NREP 1 RP:PFM:REP 8->332|PF01867|1e-58|42.6|312/315|Cas_Cas1| HM:PFM:NREP 1 HM:PFM:REP 8->333|PF01867|2e-101|44.6|312/316|Cas_Cas1| OP:NHOMO 291 OP:NHOMOORG 204 OP:PATTERN ---111-2-11---12--1----21--1-121221111-1--2--1-2141221-12-1-12-1-1-- 1----------------11-1-----11111-----------1-----------------------1----1111-----1-11-1111----121-----------------------------11133-1121-23333---41-233111-1--------33--131--------------1-1221-11----------------11-------1----1------------------------------------1-1--------------------1-1-3------------1----112111-11----1----22-------------11111----22----1121253241-121113-12-3----------------1-----------------------------------------------------1------------11---13-------------------------------------------------------------------------1-------1----1-1--1--------22-1----1------1-111--1--11-------2221-111-----------------1-----------------------------------------2---------------------------------------------------------------------------------------------------1--1-1-----112-------------------11-------------1--------1-----------------1--1----111------1-----21------------------------------------3113211111--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 305 STR:RPRED 88.9 SQ:SECSTR #######EEEEcccEEEEEETTEE##EEEcccEEEEcTTTccEEEEcccEEccHHHHHHHHHHTccEEEEcTTccEEEEEcccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHH##HcccHHHHHHHHHHHHHHHHHHHHHHccccccHHH##########HHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHTccccTTcccccc##ccccHHHHHHHHHHHHHHTHHHHHHHHHTTcccGGGEEEETT##EEEcHHHHHHHHHHHHHHHHcEEEEGGGTEEEEHHHHHHHHHHHHHHHH############# DISOP:02AL 1-4| PSIPRED ccccccEEEEEccccEEEEEccEEEEEEccEEEEEEcHHHccEEEEcccccccHHHHHHHHHcccEEEEEccccEEEEEEEccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccccccccEEEcHHHHHHHHHHHHHHHccEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccc //