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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49551.1
DDBJ      :             diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  276/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.37.1d.58.29
:283 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->53 3fioA PDBj 4e-04 35.0 %
:BLT:PDB   26->113 2o16A PDBj 2e-08 35.2 %
:BLT:PDB   162->234 3i5aA PDBj 4e-07 34.2 %
:RPS:PDB   4->115 2ef7A PDBj 3e-16 21.6 %
:RPS:PDB   118->271 3breA PDBj 7e-14 22.9 %
:RPS:SCOP  4->113 2o16A3  d.37.1.1 * 1e-21 32.7 %
:RPS:SCOP  122->271 1w25A3  d.58.29.2 * 9e-12 24.7 %
:HMM:SCOP  6->56 1nf7A2 d.37.1.1 * 5.6e-13 43.1 %
:HMM:SCOP  58->120 2o16A2 d.37.1.1 * 1.3e-09 41.3 %
:HMM:SCOP  122->278 1w25A3 d.58.29.2 * 1.6e-26 31.4 %
:RPS:PFM   5->107 PF00478 * IMPDH 2e-10 36.0 %
:RPS:PFM   118->220 PF00990 * GGDEF 6e-08 33.7 %
:HMM:PFM   4->56 PF00571 * CBS 1.5e-18 37.7 53/57  
:HMM:PFM   62->115 PF00571 * CBS 1.6e-11 37.0 54/57  
:HMM:PFM   118->272 PF00990 * GGDEF 4.5e-23 30.9 152/161  
:BLT:SWISS 5->122 IMDH_PYRFU 3e-18 42.2 %
:BLT:SWISS 120->283 Y4LL_RHISN 5e-07 26.1 %
:REPEAT 2|4->49|62->107
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49551.1 GT:GENE ABO49551.1 GT:PRODUCT diguanylate cyclase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1089191..1090042 GB:FROM 1089191 GB:TO 1090042 GB:DIRECTION + GB:PRODUCT diguanylate cyclase GB:NOTE TIGRFAM: diguanylate cyclase PFAM: GGDEF domain containing protein; CBS domain containing protein KEGG: mta:Moth_0521 diguanylate cyclase (GGDEF domain) GB:PROTEIN_ID ABO49551.1 GB:DB_XREF GI:134051580 InterPro:IPR000160 InterPro:IPR000644 LENGTH 283 SQ:AASEQ MNCVEQIMIRELITISPFDSVGRVVNVMEKHKIGGLPVLENKRLVGIITSRDVRKAHPNRLVADAMSREVVTVMPQFSLWQAKELMENHCIERLVVLKEDYPVGLITKSGLITELGKYTDALTGLPRAEFLYDKALEFLRKGQEIAIIFLDLDDFGFIDKQFGHVVGDEILRQMAQVLKGTTQDKLDYLCRYAGDEFAIVTIRPWEDAQRLAQGIVEAISLEKWPQLINVKGSAGVVGSQIMCCHSINREADVISDLFNMASLASTKAKKEEGSIVIAGQVKL GT:EXON 1|1-283:0| BL:SWS:NREP 2 BL:SWS:REP 5->122|IMDH_PYRFU|3e-18|42.2|116/485| BL:SWS:REP 120->283|Y4LL_RHISN|5e-07|26.1|157/827| NREPEAT 1 REPEAT 2|4->49|62->107| SEG 145->159|iaiifldlddfgfid| BL:PDB:NREP 3 BL:PDB:REP 13->53|3fioA|4e-04|35.0|40/68| BL:PDB:REP 26->113|2o16A|2e-08|35.2|88/132| BL:PDB:REP 162->234|3i5aA|4e-07|34.2|73/319| RP:PDB:NREP 2 RP:PDB:REP 4->115|2ef7A|3e-16|21.6|111/121| RP:PDB:REP 118->271|3breA|7e-14|22.9|153/322| RP:PFM:NREP 2 RP:PFM:REP 5->107|PF00478|2e-10|36.0|100/459|IMPDH| RP:PFM:REP 118->220|PF00990|6e-08|33.7|101/160|GGDEF| HM:PFM:NREP 3 HM:PFM:REP 4->56|PF00571|1.5e-18|37.7|53/57|CBS| HM:PFM:REP 62->115|PF00571|1.6e-11|37.0|54/57|CBS| HM:PFM:REP 118->272|PF00990|4.5e-23|30.9|152/161|GGDEF| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00478|IPR001093| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00478|IPR001093| RP:SCP:NREP 2 RP:SCP:REP 4->113|2o16A3|1e-21|32.7|110/130|d.37.1.1| RP:SCP:REP 122->271|1w25A3|9e-12|24.7|146/162|d.58.29.2| HM:SCP:REP 6->56|1nf7A2|5.6e-13|43.1|51/0|d.37.1.1|1/2|CBS-domain| HM:SCP:REP 58->120|2o16A2|1.3e-09|41.3|63/0|d.37.1.1|2/2|CBS-domain| HM:SCP:REP 122->278|1w25A3|1.6e-26|31.4|153/0|d.58.29.2|1/1|Nucleotide cyclase| OP:NHOMO 385 OP:NHOMOORG 325 OP:PATTERN -----11-11111111--1-1--21--1-1121-4222-111121211211-1212212211111--2 111-------------------------------------------------------------------------------22-21-11-1---------1-1-1--11--------------------------22212---11-----------------1-----1--------------1-2122-121111111111111111-122-1111122----------21-----------------------------------------------------------------------------------------11-1-1------------222----11-----3211333-2-33--11----1-111111111111111-111---11111111111-11-11-11-1111--11111111111-11---1-11---1111111111111111111--1-111----------------11--11111-----1111111111111111111111111111111111----------11111--1111111111-1111111111111-11111111---11-11111-12----------------------2--------1----11---------------------11-1----------------------------------------------------------------------------------------------111111111--1-1-------------------------------1--------------------------------------------------11-----------1--1-----------------------------1--2112112--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 273 STR:RPRED 96.5 SQ:SECSTR ccccGGGTcccccEEETTccHHHHHHHHHHTcccEEEEEETTEEEEEEEHHHHHHHHcTTccGGGTEEccccEETTccHHHHHHHHHHTccEEEEEcTTccEEEEEEHHHHHHHHHHHccTTTccccHHHHHHHHHHHHHHHHHHTccEEEEEEEETTHHHHcHHHHHHHHHHHHHHHHTTcccTTcEEEEEETTEEEEEETccHHHHHHHHHHHHHHHHTTccEEcccccTTEEccEEEEEEEEccccccccTHHHHHHHHHHHHHHHTTTc########## DISOP:02AL 1-1| PSIPRED ccEEccEEEcccEEEcccccHHHHHHHHHHccccEEEEEEccEEEEEEEccccEEccccccHHHHHccccEEEcccccHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccEEEEEEcccHHHHHHHHHHHHHHHccccccccEEEEEEEEEEEccHHEEEEcccccccHHHHHHHHHHHHHHHHHccccEEEEEEEcc //