[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49559.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  177/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.24.1
:162 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->131 3g20B PDBj 7e-07 28.6 %
:RPS:PDB   11->69 1ay2A PDBj 2e-04 25.4 %
:RPS:SCOP  38->116 1oqvA  d.24.1.2 * 3e-07 22.2 %
:HMM:SCOP  10->153 1oqwA_ d.24.1.1 * 6.3e-20 19.7 %
:RPS:PFM   8->26 PF07963 * N_methyl 9e-05 68.4 %
:RPS:PFM   33->100 PF08334 * GSPII_G 5e-09 36.8 %
:HMM:PFM   33->118 PF08334 * GSPII_G 5.3e-14 30.6 85/108  
:HMM:PFM   8->27 PF07963 * N_methyl 7.4e-07 55.0 20/20  
:BLT:SWISS 1->125 GSPG_ECOLI 5e-16 38.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49559.1 GT:GENE ABO49559.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1097546..1098034 GB:FROM 1097546 GB:TO 1098034 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:NOTE KEGG: shn:Shewana3_0154 general secretion pathway protein G GB:PROTEIN_ID ABO49559.1 GB:DB_XREF GI:134051588 InterPro:IPR000983 InterPro:IPR001082 InterPro:IPR002416 InterPro:IPR012902 LENGTH 162 SQ:AASEQ MKWVKNNRGFTMIEILVVITMIGILSTIVVPKITSQMDKPKKSRAMIEIKTIKDALDIYFAENSSYPTTQKEIAEVMRDNGVLGEKFGKYSALDPWKNPYYIKITTNEYTIWSEGPKTGTELDDIVTTNEDTEVYVDKNNNLDPSTATTDSTKNGTISTEGS GT:EXON 1|1-162:0| BL:SWS:NREP 1 BL:SWS:REP 1->125|GSPG_ECOLI|5e-16|38.2|123/145| TM:NTM 1 TM:REGION 8->30| BL:PDB:NREP 1 BL:PDB:REP 27->131|3g20B|7e-07|28.6|98/119| RP:PDB:NREP 1 RP:PDB:REP 11->69|1ay2A|2e-04|25.4|59/157| RP:PFM:NREP 2 RP:PFM:REP 8->26|PF07963|9e-05|68.4|19/19|N_methyl| RP:PFM:REP 33->100|PF08334|5e-09|36.8|68/102|GSPII_G| HM:PFM:NREP 2 HM:PFM:REP 33->118|PF08334|5.3e-14|30.6|85/108|GSPII_G| HM:PFM:REP 8->27|PF07963|7.4e-07|55.0|20/20|N_methyl| RP:SCP:NREP 1 RP:SCP:REP 38->116|1oqvA|3e-07|22.2|72/171|d.24.1.2| HM:SCP:REP 10->153|1oqwA_|6.3e-20|19.7|137/144|d.24.1.1|1/1|Pili subunits| OP:NHOMO 194 OP:NHOMOORG 177 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---11--1----------------1-------1------1-----------------1-1-------------1-------11----------------------------------------------------------1-1-1----111111-111111--11111121----1----11-------------1112---------122--1-11-------1----1-1-11---11-11--1----------------------1----1111-1111111111111111111111111-------------1-12--11111122212-111111211112121122111111-------------------1111------211111111111--1------1111--------------------------------11211112-1111--------------11111111111-11--11111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 121 STR:RPRED 74.7 SQ:SECSTR ##########cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTccccccTTTGGGGTcccccccccccccccccTTccccEEcEccccccEEEcTTccccccTTccccTTc############################### DISOP:02AL 1-6,153-163| PSIPRED cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccc //