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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49572.1
DDBJ      :             type IV pilus assembly protein PilM
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  131/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.55.1
:348 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   294->331 2o1eB PDBj 7e-04 42.1 %
:RPS:PDB   70->345 1e4gT PDBj 7e-11 14.9 %
:RPS:SCOP  186->343 1e4fT2  c.55.1.1 * 2e-04 18.8 %
:HMM:SCOP  14->172 2bh1A2 c.55.1.11 * 1.5e-14 29.1 %
:RPS:PFM   58->174 PF11104 * Competence_A 8e-17 37.1 %
:HMM:PFM   41->177 PF11104 * Competence_A 1.1e-26 30.9 136/146  
:HMM:PFM   262->308 PF08753 * NikR_C 7.9e-06 31.1 45/79  
:BLT:SWISS 106->242 FTSA_BACSU 1e-04 33.1 %
:BLT:SWISS 238->311 FLOT2_CARAU 6e-04 36.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49572.1 GT:GENE ABO49572.1 GT:PRODUCT type IV pilus assembly protein PilM GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1111290..1112336 GB:FROM 1111290 GB:TO 1112336 GB:DIRECTION + GB:PRODUCT type IV pilus assembly protein PilM GB:NOTE TIGRFAM: type IV pilus assembly protein PilM KEGG: pca:Pcar_2138 type IV pilus biogenesis protein PilM GB:PROTEIN_ID ABO49572.1 GB:DB_XREF GI:134051601 InterPro:IPR005883 LENGTH 348 SQ:AASEQ MAFFKPAGAVGLQIDTGIIRVVELKGTARFASLVTAGQIDIPDHAVVDGIVVDVQTVAQAIRDLWERHNIKDREVVLGICNQGVFMRYTTFPKIPDKKLAQALRFQAGEYFPIDNSQLVFDYAVLGEDKKANNIKLKVLLVAARKDLLDISLRTLEAAHLQPKVVDISYLALLRTLTREQLSDSLVLVDLANGLTTIQLVHEGIPRFSRVISHSLQSYAREVNVPLADENLTSLPLVAATEEVAARSYTGFNTPEDWSTTLANEIRSSVSYYLAQANAGSVEIVILSGRGARISGLAERLQEELGVRVEVLYPLKNLQESLQSNGLGFADIGTDFTSCIGLALRGLGE GT:EXON 1|1-348:0| BL:SWS:NREP 2 BL:SWS:REP 106->242|FTSA_BACSU|1e-04|33.1|124/440| BL:SWS:REP 238->311|FLOT2_CARAU|6e-04|36.1|72/428| SEG 43->57|dhavvdgivvdvqtv| BL:PDB:NREP 1 BL:PDB:REP 294->331|2o1eB|7e-04|42.1|38/258| RP:PDB:NREP 1 RP:PDB:REP 70->345|1e4gT|7e-11|14.9|269/375| RP:PFM:NREP 1 RP:PFM:REP 58->174|PF11104|8e-17|37.1|116/144|Competence_A| HM:PFM:NREP 2 HM:PFM:REP 41->177|PF11104|1.1e-26|30.9|136/146|Competence_A| HM:PFM:REP 262->308|PF08753|7.9e-06|31.1|45/79|NikR_C| RP:SCP:NREP 1 RP:SCP:REP 186->343|1e4fT2|2e-04|18.8|154/185|c.55.1.1| HM:SCP:REP 14->172|2bh1A2|1.5e-14|29.1|141/0|c.55.1.11|1/1|Actin-like ATPase domain| OP:NHOMO 134 OP:NHOMOORG 132 OP:PATTERN -------------------------------------------------------------------- -1--------------------------------------1---1---1---------------------------------1---------------------------------------------------------------11111111111------11111111------------1-1--11-1-----------------------------------------------------------------------------------------------------------------------------------------------1-11---11-1--1---1--2--121-1111--1----1-----------------------------------------------------------------------------------------------------------------------------------------------------------1111-------1----1-----1--11---------11---11111111--------111111111-11-1111-------------------------1----1111--1111--1------11-11111---1--1--------------------------------------------------------------------------------------------1-----1111111-----------------1111111----11111--1-1----1111----------------------------------1111----------------------------------------------------------1 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 279 STR:RPRED 80.2 SQ:SECSTR #####################################################################EEEEEEEEEEcTTccEEccHHHHHHHHHHHHHHccTEEEEEEEEccccEEcccTHHHTEEcEEEEEEEEEEEEHHHHHHHHHHHTTccccEEEEEHHHHGGHHHHHccHHHHHHcEEEEEcccccEEEEEEETTEEEEEEEEcHHHHHHHHccccHHHHHHHHHHHcccccTTccccEEEEEcTTcccEEEHHHHHHHHHHHHHHHHTccccccEEEEcGGGGcTTHHHHHHHHHcccccEEEcccTTccccccccccccTTcGGGHHHHHHHHTTHHH DISOP:02AL 1-5,131-132,237-248,348-349| PSIPRED ccccccccEEEEEEcccEEEEEEEEEEcccEEEEEEEEEEcccccccccEEEcHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEEEEcccccHHHHHHHHHHHHHHcccccHHHEEEEEEEccccccccccEEEEEEEEEcHHHHHHHHHHHHHccccEEEEEHHHHHHHHHHHHccccccEEEEEccccEEEEEEEEccEEEEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHcccEEEEccHHHccccccccccccccccHHHHHHHHHHHHcccc //