[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49712.1
DDBJ      :             VanW family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  131/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:467 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   228->358 PF04294 * VanW 5e-38 55.0 %
:HMM:PFM   228->358 PF04294 * VanW 2.1e-53 53.4 131/132  
:HMM:PFM   76->185 PF12229 * PG_binding_4 3.1e-17 22.2 108/114  
:HMM:PFM   370->440 PF07501 * G5 4.6e-16 32.4 71/79  
:HMM:PFM   43->69 PF04485 * NblA 0.00073 22.2 27/53  
:BLT:SWISS 23->192 YH04_SCHPO 2e-05 31.6 %
:BLT:SWISS 228->359 VANW_ENTFA 2e-12 29.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49712.1 GT:GENE ABO49712.1 GT:PRODUCT VanW family protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1251781..1253184 GB:FROM 1251781 GB:TO 1253184 GB:DIRECTION + GB:PRODUCT VanW family protein GB:NOTE PFAM: VanW family protein KEGG: chy:CHY_0544 VanW domain protein GB:PROTEIN_ID ABO49712.1 GB:DB_XREF GI:134051741 InterPro:IPR007391 InterPro:IPR011098 LENGTH 467 SQ:AASEQ MAGRIVLLGIVAFFIGVAVAFFEMESAEARKIPAGTYVQGVELSNLEKKQAEQRLVQIAESIMNRQATLTYQDKSWTFSLQQLGVVVNVEDTLYKALQGKEHSFIKEITTYFYPEKKEITLTMAVNKEKLKTVLAPIFQTIERPATDAVLTVLDNEEILVKPDQKGIKVDVKKLCEDLLKASVNQENPRVQFKIIETFAAKTLADIQGLNINGKISSFTTNFNGKNVNRTINIRTAARKIDGLILAPGEEFSFNRRVGERTSNAGYRPAAVIVGNKFDDALGGGICQVSTTLYNAILLANLTPSERHNHSLAISYVPLGRDAAVAWDFLDFKFKNTLPGHLYLRTIVGRDYITVQVYGDVNQKRDILIRSWVTEIIEPDVKKETDPKLQPGQEILIQAGSPGFKAQSERVIREKGVVIKREALPTSYYHARAKQVKVGPEQTNKPMGENSVEQQEPEIEKNLAQTES GT:EXON 1|1-467:0| BL:SWS:NREP 2 BL:SWS:REP 23->192|YH04_SCHPO|2e-05|31.6|136/100| BL:SWS:REP 228->359|VANW_ENTFA|2e-12|29.5|132/275| TM:NTM 1 TM:REGION 3->24| SEG 9->22|givaffigvavaff| RP:PFM:NREP 1 RP:PFM:REP 228->358|PF04294|5e-38|55.0|131/132|VanW| HM:PFM:NREP 4 HM:PFM:REP 228->358|PF04294|2.1e-53|53.4|131/132|VanW| HM:PFM:REP 76->185|PF12229|3.1e-17|22.2|108/114|PG_binding_4| HM:PFM:REP 370->440|PF07501|4.6e-16|32.4|71/79|G5| HM:PFM:REP 43->69|PF04485|0.00073|22.2|27/53|NblA| OP:NHOMO 224 OP:NHOMOORG 131 OP:PATTERN -------------------------------------------------------------------- -----111111111-------1----------1---1111----11-11------1-1--111-111--1----------1-2-----------------------------------------------------33322---313------11-----------------1-----1----32311------2222232222223321111-1223---11-1------33--------------------1---------------------------------------------------------------------12311333333313112111122123--1-122663423-3121111--1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1----12--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111--1----------------------------------------------------11----------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,440-468| PSIPRED cccEEEEEEHHHHHHHHEEEEEcccccccccccccEEEccEEcccccHHHHHHHHHHHHHHccccEEEEEEccEEEEEEHHHccccccHHHHHHHHHccccccHHHHHHHHccccccccccccEEcHHHHHHHHHHHHHHHccccccEEEEEEcccEEEEEEccccccccHHHHHHHHHHHHccccccEEEEEEEEEcccccHHHHHHcccccEEEEEEEEEcccccccEEcHHHHHHHHccEEEccccEEEcccccccccccccccccEEEEccEEEEccccHHHHHHHHHHHHHHHcccEEEEEcccccccccccccccEEEEcccEEEEEEcccccEEEEEEEEEccEEEEEEEEccccccEEEEEEEEEEEcccccEEEEccccccccEEEEEcccccEEEEEEEEEEEccEEEEEEEEEEEEEcccccEEEEcccccccccccccccccccHHHHccccccc //