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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49715.1
DDBJ      :             methyl-accepting chemotaxis sensory transducer
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  466/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
a.154.1d.110.6d.92.1h.4.5
:621 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   130->283 3c8cA PDBj 1e-16 36.3 %
:BLT:PDB   379->584 1qu7A PDBj 8e-11 36.0 %
:RPS:PDB   61->284 3c8cA PDBj 4e-33 22.5 %
:RPS:PDB   312->357 2aswA PDBj 1e-05 37.0 %
:RPS:PDB   340->619 2ch7A PDBj 2e-27 17.5 %
:RPS:SCOP  80->192 2basA2  d.110.6.2 * 1e-14 20.8 %
:RPS:SCOP  325->400 1l8wA  a.154.1.1 * 3e-08 14.5 %
:RPS:SCOP  376->583 3cmnA1  d.92.1.16 * 6e-18 9.7 %
:HMM:SCOP  53->196 2basA2 d.110.6.2 * 4.4e-13 24.2 %
:HMM:SCOP  203->267 1p0zA_ d.110.6.1 * 0.00096 26.2 %
:HMM:SCOP  326->620 2ch7B1 h.4.5.1 * 1e-66 38.0 %
:RPS:PFM   150->225 PF02743 * Cache_1 7e-18 42.1 %
:RPS:PFM   307->354 PF00672 * HAMP 7e-04 27.1 %
:RPS:PFM   337->418 PF00015 * MCPsignal 5e-04 23.2 %
:RPS:PFM   429->584 PF00015 * MCPsignal 2e-15 35.9 %
:HMM:PFM   428->618 PF00015 * MCPsignal 4.5e-50 42.4 191/213  
:HMM:PFM   150->223 PF02743 * Cache_1 1.4e-22 47.9 73/80  
:HMM:PFM   287->354 PF00672 * HAMP 7.5e-13 29.4 68/70  
:HMM:PFM   342->416 PF07889 * DUF1664 6.9e-07 13.3 75/126  
:HMM:PFM   113->145 PF02203 * TarH 5.5e-05 30.3 33/137  
:BLT:SWISS 38->609 TLPA_BACSU 3e-49 27.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49715.1 GT:GENE ABO49715.1 GT:PRODUCT methyl-accepting chemotaxis sensory transducer GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1256453..1258318 GB:FROM 1256453 GB:TO 1258318 GB:DIRECTION + GB:PRODUCT methyl-accepting chemotaxis sensory transducer GB:NOTE PFAM: histidine kinase, HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer KEGG: tte:TTE0448 methyl-accepting chemotaxis protein GB:PROTEIN_ID ABO49715.1 GB:DB_XREF GI:134051744 InterPro:IPR003660 InterPro:IPR004010 InterPro:IPR004089 LENGTH 621 SQ:AASEQ MSMVPSSRIKPSGSLKFQVSVFIAILLIVCVMAVSWLSISKMEKAINQKVKEGEMVASLIIREEIQHFLDSKGEIVKNLSLAQEFQSQDKKQILKLLLSAQNQSEFQNIYFVTGSGEITIAPVKQLPKDFDPRQRVWYQEAVKKGTMVCTDPYIDQATGKPCMTVALAVKDSEGRFVGVLGADIKLETISSLAVKYKFGEEGYFYVCDKQGKVIGHPDAKAINGDIMNRAYVKAALAGKSGFDTYADNGVKKLVYYSEIPKTGWGLFVQQPEQEAYAELYRARNMIIIITLLILASALVISLYFTGKMVNVIKMVGEGARAIAQGNLTYSLTIARKDELGILSDSINEMTNHLKTIIGGVKDSTNRVTGACNSMAVSMEQIHEASDKNASDISNVAATTEQITASAENINEMVGSVSLSAQHGQEEIGEVIGAMEGIKSSTNEISRAISEVENQSKKIQHITTIITQIAEQTNLLALNAAIEAARAGEHGKGFTVVADEVRKLAEQTSAATREIHGVIENVYASVRDSVDKMLTGNEMVEMGSQRVQEAGEVFKTITINIEELVEKMAQITRATITMSASIQNVAAASQEQAAIIEEENKMVEDLRQSAIVLDNMVQKFVV GT:EXON 1|1-621:0| BL:SWS:NREP 1 BL:SWS:REP 38->609|TLPA_BACSU|3e-49|27.2|562/662| TM:NTM 2 TM:REGION 17->39| TM:REGION 288->310| SEG 286->302|iiiitllilasalvisl| SEG 458->472|iqhittiitqiaeqt| SEG 474->486|llalnaaieaara| SEG 585->598|aaasqeqaaiieee| BL:PDB:NREP 2 BL:PDB:REP 130->283|3c8cA|1e-16|36.3|146/238| BL:PDB:REP 379->584|1qu7A|8e-11|36.0|178/227| RP:PDB:NREP 3 RP:PDB:REP 61->284|3c8cA|4e-33|22.5|218/238| RP:PDB:REP 312->357|2aswA|1e-05|37.0|46/56| RP:PDB:REP 340->619|2ch7A|2e-27|17.5|280/309| RP:PFM:NREP 4 RP:PFM:REP 150->225|PF02743|7e-18|42.1|76/79|Cache_1| RP:PFM:REP 307->354|PF00672|7e-04|27.1|48/69|HAMP| RP:PFM:REP 337->418|PF00015|5e-04|23.2|82/210|MCPsignal| RP:PFM:REP 429->584|PF00015|2e-15|35.9|156/210|MCPsignal| HM:PFM:NREP 5 HM:PFM:REP 428->618|PF00015|4.5e-50|42.4|191/213|MCPsignal| HM:PFM:REP 150->223|PF02743|1.4e-22|47.9|73/80|Cache_1| HM:PFM:REP 287->354|PF00672|7.5e-13|29.4|68/70|HAMP| HM:PFM:REP 342->416|PF07889|6.9e-07|13.3|75/126|DUF1664| HM:PFM:REP 113->145|PF02203|5.5e-05|30.3|33/137|TarH| GO:PFM:NREP 10 GO:PFM GO:0016020|"GO:membrane"|PF02743|IPR004010| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00015|IPR004089| GO:PFM GO:0007165|"GO:signal transduction"|PF00015|IPR004089| GO:PFM GO:0016020|"GO:membrane"|PF00015|IPR004089| GO:PFM GO:0004871|"GO:signal transducer activity"|PF00015|IPR004089| GO:PFM GO:0007165|"GO:signal transduction"|PF00015|IPR004089| GO:PFM GO:0016020|"GO:membrane"|PF00015|IPR004089| RP:SCP:NREP 3 RP:SCP:REP 80->192|2basA2|1e-14|20.8|106/145|d.110.6.2| RP:SCP:REP 325->400|1l8wA|3e-08|14.5|76/271|a.154.1.1| RP:SCP:REP 376->583|3cmnA1|6e-18|9.7|207/294|d.92.1.16| HM:SCP:REP 53->196|2basA2|4.4e-13|24.2|132/0|d.110.6.2|1/1|Sensory domain-like| HM:SCP:REP 203->267|1p0zA_|0.00096|26.2|65/0|d.110.6.1|2/2|Sensory domain-like| HM:SCP:REP 326->620|2ch7B1|1e-66|38.0|284/0|h.4.5.1|1/1|Methyl-accepting chemotaxis protein (MCP) signaling domain| OP:NHOMO 3259 OP:NHOMOORG 494 OP:PATTERN -----------------------23224-1-7------4653131-16--111-2-2-31-------- -2------------------------------------------1---3-------------1-1-------------------311---------------------2-----------------------2-2-23321---21234455--1--------221-2241--------------2-----2959999AA6DA968AA76BA988899544a457111111JB--------------------------------------------------1-----------------1--1------11----------3EEHVEEEEDED9AFC-DD7---F87--14491KL8B77DB4222632---6----4-------352--111--3--------------3--1-111--366956688556--2-11--121132----------331-333-------------------------------3--286444B9A99BQ545599BD565744ABF7C79--77B64B56E149518B92615C8-------22113658A4K-352BD666-DGEG8EIAA2212I4431145-2121-2---------15341--GA-7758928-9IKIL67DFCEHADBAHEB--11288------7BRK3D83333333343-3323333333333333333---LM118555466655555554642212222--856675666776---1---------21DAJ---------------111111-11166DDCBHIEMAABCEHOMP---------83ABIFGGHG9CEKG44BBFBD6771111--4V332233111-----D1--------------------------1-83565445--- --------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-----------2--3-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 554 STR:RPRED 89.2 SQ:SECSTR #########################################GHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHcccEEEEETTTccEEEccTTcccccccGGGcHHHHHHHHHTccEEcccEEcTTTccEEEEEEEEEEcTTccEEEEEEEEEcHHHHHHHHTccccTTcEEEEEEETTccEEEcccGGGTTccHHHHcccTTccccccccEEEEETTEEEEEEEEEcTTccEEEEEEEcHHHHHHHHHHHHT########################GGGEEEETTEEEEEcTTcTTTcccEEEEccHcTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH## DISOP:02AL 1-13,47-60,81-94,222-225,228-239,360-396,403-457,507-514,525-551,569-614| PSIPRED ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccEEEEEEEccccEEEcccccccccccccccHHHHHHHHcccEEEEccEEccccccEEEEEEEEEEcccccEEEEEEEcccHHHHHHHHHcccccccEEEEEEcccccEEEcccHHHcccccccHHHHHHHHHccccEEEEEEccEEEEEEEEEcccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //