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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49768.1
DDBJ      :             Serine-type D-Ala-D-Ala carboxypeptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  661/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
d.82.1e.3.1
:437 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   64->305 1xp4C PDBj 1e-28 36.0 %
:RPS:PDB   68->310 3bffA PDBj 7e-31 12.7 %
:RPS:PDB   337->423 1d6uA PDBj 5e-11 19.5 %
:RPS:SCOP  60->308 1hd8A2  e.3.1.1 * 2e-64 30.3 %
:RPS:SCOP  337->416 1d6uA4  d.82.1.1 * 1e-10 21.2 %
:HMM:SCOP  1->310 1tvfA2 e.3.1.1 * 2.3e-73 40.6 %
:HMM:SCOP  335->418 1oacA4 d.82.1.1 * 3.2e-15 27.4 %
:RPS:PFM   64->291 PF00768 * Peptidase_S11 6e-46 43.3 %
:RPS:PFM   333->420 PF07833 * Cu_amine_oxidN1 5e-10 28.4 %
:HMM:PFM   63->290 PF00768 * Peptidase_S11 1e-72 44.4 225/241  
:HMM:PFM   296->357 PF07833 * Cu_amine_oxidN1 2.1e-06 26.8 56/93  
:HMM:PFM   333->422 PF07833 * Cu_amine_oxidN1 2.1e-22 27.8 90/93  
:BLT:SWISS 66->311 DACF_BACSU 9e-44 37.2 %
:BLT:SWISS 332->425 KAD_NITSB 7e-04 27.7 %
:PROS 1->44|PS00430|TONB_DEPENDENT_REC_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49768.1 GT:GENE ABO49768.1 GT:PRODUCT Serine-type D-Ala-D-Ala carboxypeptidase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1308934..1310247 GB:FROM 1308934 GB:TO 1310247 GB:DIRECTION + GB:PRODUCT Serine-type D-Ala-D-Ala carboxypeptidase GB:NOTE PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; copper amine oxidase domain protein KEGG: gka:GK2311 D-alanyl-D-alanine carboxypeptidase (penicilin binding protein) GB:PROTEIN_ID ABO49768.1 GB:DB_XREF GI:134051797 InterPro:IPR001967 InterPro:IPR010916 InterPro:IPR012854 LENGTH 437 SQ:AASEQ MPRIVYCSLCSALILVLLILCSYPVETGLYTFANNHNSIQVRGSLGEGATALTYAPGICNPINLTAKGAILVNQDTGQVIYADQEHQPFHPASITKLMVLYILLENIHNGVLHWEDPVQASKKVERINEAQIYLREGEVLSLEEMIKAMVVASANDAAVALAERVAGSEAAFVEIMNAKALELGLRNSHFINASGLPASNSYNHYMSAYDIALLAKYLLEEYPEVLEFSRLTTTTIRNGSFPIANTNSLLGIFQGMDGLKTGYTDRAGWCLVATAQRNGQRMISVVLGSPSNEIRKANTTALLNYGFQHYQRVNNIYVNGIKCNYIQSPLAVDGTVLVPINILSDTMGLKVQYQKEKIFLSGWGTQVEFQVDSDKAIWSNKAIKLPQPVQKVKGTIMVPVRFISQIFGADVQWDGKKKSIHIYTEMHRTLGENRLMF GT:EXON 1|1-437:0| BL:SWS:NREP 2 BL:SWS:REP 66->311|DACF_BACSU|9e-44|37.2|242/389| BL:SWS:REP 332->425|KAD_NITSB|7e-04|27.7|94/194| PROS 1->44|PS00430|TONB_DEPENDENT_REC_1|PDOC00354| TM:NTM 2 TM:REGION 4->26| TM:REGION 46->68| SEG 7->22|cslcsalilvllilcs| SEG 148->162|amvvasandaavala| BL:PDB:NREP 1 BL:PDB:REP 64->305|1xp4C|1e-28|36.0|236/350| RP:PDB:NREP 2 RP:PDB:REP 68->310|3bffA|7e-31|12.7|237/262| RP:PDB:REP 337->423|1d6uA|5e-11|19.5|87/717| RP:PFM:NREP 2 RP:PFM:REP 64->291|PF00768|6e-46|43.3|224/235|Peptidase_S11| RP:PFM:REP 333->420|PF07833|5e-10|28.4|88/91|Cu_amine_oxidN1| HM:PFM:NREP 3 HM:PFM:REP 63->290|PF00768|1e-72|44.4|225/241|Peptidase_S11| HM:PFM:REP 296->357|PF07833|2.1e-06|26.8|56/93|Cu_amine_oxidN1| HM:PFM:REP 333->422|PF07833|2.1e-22|27.8|90/93|Cu_amine_oxidN1| GO:PFM:NREP 2 GO:PFM GO:0006508|"GO:proteolysis"|PF00768|IPR001967| GO:PFM GO:0009002|"GO:serine-type D-Ala-D-Ala carboxypeptidase activity"|PF00768|IPR001967| RP:SCP:NREP 2 RP:SCP:REP 60->308|1hd8A2|2e-64|30.3|234/243|e.3.1.1| RP:SCP:REP 337->416|1d6uA4|1e-10|21.2|80/84|d.82.1.1| HM:SCP:REP 1->310|1tvfA2|2.3e-73|40.6|276/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| HM:SCP:REP 335->418|1oacA4|3.2e-15|27.4|84/86|d.82.1.1|1/1|Copper amine oxidase, domain N| OP:NHOMO 1550 OP:NHOMOORG 665 OP:PATTERN -------------------------------------------------------------------- 1---1--1---------11-1211-1111111222211--1-11----------------22--1112----------11211------------------------------------------111-11111-1---------2---------------------------------------------33388888998898899844443389933354122222224511111111111111121-2111411112211222211121-111112222333211111111111112333333332333211221111335344333344343454554444448225233466555234333353212-1-111123333333333333333344444343444-333333334422444455455544332222222222222222222222222232211111111----11111111111111111111211222222112121444411325555342221112112222222222242222222212222222221122221-----1-22-111-1-1---1--------121--------------------1---33332121111112222222122221211211--11111------33224434443434443-44544444444444444433333322233323333333232235224322321333334333333--11111111111211211111-11112-11-13333333222112222211121111211111111111111114333333322222111111111111111-------1111111111------------------------------------211 --------------------------------------------------------------------------------------------------------------------------------------------------------------1------1-------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 87.4 SQ:SECSTR ##########################HHHHcccccccccHHHHHHHTEEEEEEEETTEcHHHcccccEEEEEETTTTEEEEEccTTccEEcGGGHHHHHHHHHHHHHTTcTTGGGcEEEccTTTcccccTTGGGcTTcEEEHHHHHHHHHHcccHHHHHHHHHHHTcHHHHHHHHTTcccccccccTTGGGcccTTccTGGcTTEEcHHHHHHHHHHHHTcccccHHHHHHHHHHHHHTccccTTTGGGGccTTcEEEEEEEEETTTEEEEEEEEEcTTcccEEEEEEEEcccTTccccHHHHHHHHHHHTTccEEcTTc################cEEHHHHHHHHTcEEEEETTEEEEEETTEEEEEcTTccEEEETTEEEEcccccEEccccEEEcTTHHHHHHTccccccEEccccccTT############# DISOP:02AL 1-1| PSIPRED ccHHHHHHHHHHHHHHHHHHHEEEEccccccccccccEEEEccccccccccccccccccccccccccEEEEEEcccccEEEEEccccccccHHHHHHHHHHHHHHHHHccccccccEEEccHHHccccccEEEEccccEEEHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccEEccccccccccccccEEcHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccEEEEEEccccccccccEEEEEEcccccccEEEEEEEEccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEcccccccccEEEEccccEEEEcccEEEEEEEcccEEEEccEEEccccccEEEccEEEEEHHHHHHHHccEEEEcccccEEEEEEcccccEEEEEEEc //