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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49787.1
DDBJ      :             2-hydroxymethylglutarate dehydratase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  584/915 : Eukaryota  27/199 : Viruses  0/175   --->[See Alignment]
e.44.1
:294 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  27->283 1szqA  e.44.1.1 * 9e-21 9.3 %
:RPS:PFM   53->277 PF03313 * SDH_alpha 5e-26 40.7 %
:HMM:PFM   15->277 PF03313 * SDH_alpha 8.8e-80 46.1 258/283  
:BLT:SWISS 3->288 SDHA_BACSU 2e-68 48.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49787.1 GT:GENE ABO49787.1 GT:PRODUCT 2-hydroxymethylglutarate dehydratase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1324796..1325680 GB:FROM 1324796 GB:TO 1325680 GB:DIRECTION + GB:PRODUCT 2-hydroxymethylglutarate dehydratase GB:NOTE TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit PFAM: serine dehydratase alpha chain KEGG: bld:BLi01807 probable L-serine dehydratase (alpha chain); RBL04042 GB:PROTEIN_ID ABO49787.1 GB:DB_XREF GI:134051816 InterPro:IPR004642 InterPro:IPR005130 LENGTH 294 SQ:AASEQ MKYRTVAELVKLAQEEGLSIGQTVMNQESQTTGRPREEVLSNMEKSLRVMEQAVEKGINEEVVSRSGLTGGDAKRLRDYAKSGQSLSKGVVLDAVNYALATSEVNASMGLIVATPTAGSSGVLPGCLLAVGKHLGSKRENMVNALFNAGGIGFVIANNATISGAAGGCQAEIGAAAAMAASAVVELAGGTPEQCSQGAAIALKNLLGLACDPVAGLVEVPCVKRNSMGAAVAIVAADMALAGITSVIPCDEVIEAMYKIGTMLPSCLRETSLAGLAITPTGEELNQKVHNLNKE GT:EXON 1|1-294:0| BL:SWS:NREP 1 BL:SWS:REP 3->288|SDHA_BACSU|2e-68|48.8|285/300| SEG 163->188|gaaggcqaeigaaaamaasavvelag| SEG 227->243|mgaavaivaadmalagi| RP:PFM:NREP 1 RP:PFM:REP 53->277|PF03313|5e-26|40.7|209/275|SDH_alpha| HM:PFM:NREP 1 HM:PFM:REP 15->277|PF03313|8.8e-80|46.1|258/283|SDH_alpha| RP:SCP:NREP 1 RP:SCP:REP 27->283|1szqA|9e-21|9.3|248/473|e.44.1.1| OP:NHOMO 846 OP:NHOMOORG 612 OP:PATTERN ----------------------------------------------------------------1--- 111-111-11111----11-111111111111-----1331---1-11-11-333111--11-1112111-11111111111------1111-111---1111111-1-1--------------1-----------------------------------------1----------------11111--1-1122222111121221111111112211111111111111-1111111111111112111121--11---1111111111----11111111111--1111111111111111111111111111111111-11121111111111-111122221-11-1---11-1--1121111--1-1-22111-1111-1------------111-111111-11-1121-21--111111111111211111111111111--------11111-----------------------------------211111112222222111122222222122331211--11311111--11-1-11----211111-1111--------11121-2111--------------11-------1111111-1111111-------2211--111112111112211112122122--1----------42222213333332333-3333333333333333332222221123323343333344433233333331-211111111111---1111111111--111111-111111----111111--1111-22223333133341111111111111-222222222322231111111111-------1--------------1---------------------------1-111-1-----1 ------------111-1-------------------------------11111111---------------------------------1111111----111222--2------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,291-295| PSIPRED cccccHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccc //