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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49862.1
DDBJ      :             4Fe-4S ferredoxin, iron-sulfur binding domain protein
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  58/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.3.1d.58.1
:1007 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   110->177 1clfA PDBj 5e-05 47.7 %
:BLT:PDB   600->645 2iveB PDBj 9e-05 43.5 %
:BLT:PDB   934->988 1h7xB PDBj 3e-05 37.0 %
:RPS:PDB   94->209 1d0cB PDBj 9e-06 13.3 %
:RPS:PDB   597->821 2bc0A PDBj 3e-08 12.3 %
:RPS:PDB   935->996 1bluA PDBj 3e-09 22.6 %
:RPS:SCOP  105->184,937->987 1kqfB1  d.58.1.5 * 1e-11 33.3 %
:RPS:SCOP  595->702 1dxlA2  c.3.1.5 * 8e-10 17.7 %
:HMM:SCOP  10->437 1coyA1 c.3.1.2 * 3.3e-31 20.3 %
:HMM:SCOP  592->925 1reoA1 c.3.1.2 * 1.1e-23 24.8 %
:HMM:SCOP  934->1004 2fug91 d.58.1.5 * 2.2e-15 29.6 %
:RPS:PFM   105->121 PF00037 * Fer4 5e-04 70.6 %
:RPS:PFM   599->705 PF07992 * Pyr_redox_2 5e-06 46.2 %
:HMM:PFM   105->123 PF00037 * Fer4 4.9e-08 73.7 19/24  
:HMM:PFM   165->178 PF00037 * Fer4 2.4e-05 57.1 14/24  
:HMM:PFM   937->956 PF00037 * Fer4 4.2e-07 45.0 20/24  
:HMM:PFM   972->987 PF00037 * Fer4 9e-06 68.8 16/24  
:HMM:PFM   10->44 PF01266 * DAO 1.6e-09 47.1 34/358  
:HMM:PFM   598->717 PF07992 * Pyr_redox_2 4.6e-09 27.2 114/202  
:BLT:SWISS 20->415 HDRA2_METKA e-103 46.9 %
:BLT:SWISS 451->681 HDRA2_METKA 1e-53 45.5 %
:BLT:SWISS 695->1005 HDRA2_METKA 4e-53 39.8 %
:PROS 110->121|PS00198|4FE4S_FER_1
:PROS 973->984|PS00198|4FE4S_FER_1
:REPEAT 2|188->434|693->925
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49862.1 GT:GENE ABO49862.1 GT:PRODUCT 4Fe-4S ferredoxin, iron-sulfur binding domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1423014..1426037 GB:FROM 1423014 GB:TO 1426037 GB:DIRECTION + GB:PRODUCT 4Fe-4S ferredoxin, iron-sulfur binding domain protein GB:NOTE PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: sfu:Sfum_3133 4Fe-4S ferredoxin, iron-sulfur binding domain protein GB:PROTEIN_ID ABO49862.1 GB:DB_XREF GI:134051891 InterPro:IPR001327 InterPro:IPR001450 InterPro:IPR013027 LENGTH 1007 SQ:AASEQ MTDQKYFGSVLVVGGGISGMQSALDLAESGYRVYLVEKKPAIGGTMARLDKTFPTNDCAMCTMSPKLVDVGRHLNIEIITGAELIGLEGEAGNFKAKVLQQARCVDISKCIGCGACAEVCPVKVQDDFDAGLGQRKAIYKLYAQATPNAFAVDKTKCLKIKNPKACGKCAKECPAGAIDHAMADTTLELEVGAVILSPGFEPMDGDLRGEFGWGIYQNVVTSLQFERLLSASGPTMGHLVRPSDHVEPKRIAFLQCVGSRDKAKGNPYCSAVCCMYATKHAIIAQEHEAGLETKIFYMDIRAYGKDFEKYYDRARIQHGVKYEKAMISSVKEDPQTKNIIVKYRNPDGSFNEEQFDMLVLSVGLKPSAGNQKLAEACQIQLDDFGFCKTVEFSPGLTTREGVFAGGAFCAPKDIPETVVDASAAAANASRLLSQVRGSLSKKKEYPPERDVTSEDPRVGVFVCNCGINIGSVVRVPEVAEFAKTIPNVVHSEEFLFSCSQDSIEKIKERIKEHQLNRVVVASCTPRTHAPLFMSSLKEAGINPYLFEQANIREHSSWVHRDNPAAATEKAKDLVKMAVAKVKLLKPVYTSFMDINRKALVIGGGVAGMANALNLAGQGFQVILVERTDKLGGHALDGRYTMKGNNPAELAAKLAGEVQIHPNIDLNLNSTIKKVAGYLGNYKTTLTTPAGERDVEHGVVIIATGADQATTSEYLYGQHEAVCTQRELEHKLDGSGIGGAKTVVMIQCVGSRDENRPYCSRICCYNAIKNALKMKELDPTVNIFIIYRDIRTYGFYETYYAEARRKGVVFIRYTLDNKPRVEPRSNGLKVHVKDPILNKILELDTDLLVLSTGIEPAKGTDTLSQLFKVSLNADGFFSEAHMKLRPIDFAADGLYLCGLAHSPKLIDESIAQANAAAVRAVTMLSKDKLESLGNVAMVNPKWCKGCGLCIEACSYGARVMNEMTHVAEVLDVLCQGCGACVAACPSGACQQKGFEKQQIIAMLDASNS GT:EXON 1|1-1007:0| BL:SWS:NREP 3 BL:SWS:REP 20->415|HDRA2_METKA|e-103|46.9|390/656| BL:SWS:REP 451->681|HDRA2_METKA|1e-53|45.5|230/656| BL:SWS:REP 695->1005|HDRA2_METKA|4e-53|39.8|307/656| PROS 110->121|PS00198|4FE4S_FER_1|PDOC00176| PROS 973->984|PS00198|4FE4S_FER_1|PDOC00176| NREPEAT 1 REPEAT 2|188->434|693->925| SEG 8->19|gsvlvvgggisg| SEG 76->92|ieiitgaeliglegeag| SEG 421->429|asaaaanas| SEG 569->585|kakdlvkmavakvkllk| SEG 910->919|aqanaaavra| BL:PDB:NREP 3 BL:PDB:REP 110->177|1clfA|5e-05|47.7|44/55| BL:PDB:REP 600->645|2iveB|9e-05|43.5|46/450| BL:PDB:REP 934->988|1h7xB|3e-05|37.0|54/1019| RP:PDB:NREP 3 RP:PDB:REP 94->209|1d0cB|9e-06|13.3|113/414| RP:PDB:REP 597->821|2bc0A|3e-08|12.3|220/472| RP:PDB:REP 935->996|1bluA|3e-09|22.6|62/80| RP:PFM:NREP 2 RP:PFM:REP 105->121|PF00037|5e-04|70.6|17/24|Fer4| RP:PFM:REP 599->705|PF07992|5e-06|46.2|93/275|Pyr_redox_2| HM:PFM:NREP 6 HM:PFM:REP 105->123|PF00037|4.9e-08|73.7|19/24|Fer4| HM:PFM:REP 165->178|PF00037|2.4e-05|57.1|14/24|Fer4| HM:PFM:REP 937->956|PF00037|4.2e-07|45.0|20/24|Fer4| HM:PFM:REP 972->987|PF00037|9e-06|68.8|16/24|Fer4| HM:PFM:REP 10->44|PF01266|1.6e-09|47.1|34/358|DAO| HM:PFM:REP 598->717|PF07992|4.6e-09|27.2|114/202|Pyr_redox_2| GO:PFM:NREP 2 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00037|IPR001450| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF00037|IPR001450| RP:SCP:NREP 2 RP:SCP:REP 105->184,937->987|1kqfB1|1e-11|33.3|125/244|d.58.1.5| RP:SCP:REP 595->702|1dxlA2|8e-10|17.7|96/123|c.3.1.5| HM:SCP:REP 10->437|1coyA1|3.3e-31|20.3|330/372|c.3.1.2|1/2|FAD/NAD(P)-binding domain| HM:SCP:REP 592->925|1reoA1|1.1e-23|24.8|303/0|c.3.1.2|2/2|FAD/NAD(P)-binding domain| HM:SCP:REP 934->1004|2fug91|2.2e-15|29.6|71/0|d.58.1.5|2/2|4Fe-4S ferredoxins| OP:NHOMO 236 OP:NHOMOORG 91 OP:PATTERN ------1111111111-------4--------2211-22211222222112222----------3--- ---1-----------------------------------------------------------------------------1-11-------1--------------------------------1331111131----------1--1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------16--7722-124--------4---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-------------------FD33754242333-2321212--1111--9M-------------------------11------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 459 STR:RPRED 45.6 SQ:SECSTR ############################################################################################HHHHHHHHHHHHHccccccHHHHHHHHHHHHHTcTTcTTGGGTTccEEEEccccccHHHHHHHHHHHHHHccHHHGGGccccEEEEcccccTTccccEEcccccccEEEcccccEEE##########################################################################################################################################################################################################################################################################################################################################################################################HHHTTcccEEEEEEcccHHHHHHHHHHHHHHGGGcEEEEEcccccccccGGHHTTcccccGGGccccHHHHHHTTcEEETTccEEEEETTTTTTEEEEEETTEEEEEEccEEEEcccEccEEccccccTccccTTcTTcccccTTEEEcccHHHHHHHHHHTTcTTccEEEEEcccHHHHHHHHHHHHTTcEEEEEEEccccTTTTTccHHHHHHHHHHHHTTTcEEEETccEEcccccEEEEEEEccccccEEEEEcEEEccccEHHTT##########################################################################TTEcEEEcTTcccccTTGGGcTTccEEEccccEEGccTTTTTccccHHHHHcTTccEEEcTTcccHHGGGcc#### DISOP:02AL 1-6,1006-1008| PSIPRED cccccccccEEEEcccHHHHHHHHHHHHcccEEEEEEccccccccEEHHHHHccccccccccHHHHHHHHHccccEEEEcccEEccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccEEEccccccccEEEEcHHHHccccccccccHHHHccccccEEEEEcccEEEEEccEEEEEccccHHccccccccccccccccccHHHHHHHHcccccccEEEEEcccccccEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEEEcccccccHHHHHHHHHHHcccEEEEEEEEEEEEcccccEEEEEEEccccEEEEEEccEEEEEEEEEccccHHHHHHHcccccccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccEEEEEEEcccccHHccccHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEcHHHccHHHHHHHHHccccHHEEEEEEEccccEEEEcccHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccEEEccccccccccHHHHHHHHHHHHHcccccEEEccEEEEEEcccccccEEEEEccccEEEEEcccEEEEccccccccccccccccccEEEHHHHHHHHHccccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHcccEEEEcEEcccEEEEccccEEEEEEEEcccccEEEEEccEEEEEcccccccccHHHHHHccccccccccEEccccccccccccccccEEEEcccccccHHHHHHHHHcccccEEEEEcccccccccccEEEcHHHccccccHHHHcccccEEEEccccEEEEcHHHccccccHHHHcccccEEEccccHHHHHHHHHHccc //