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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49882.1
DDBJ      :             pseudouridine synthase, RluA family
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  903/915 : Eukaryota  146/199 : Viruses  0/175   --->[See Alignment]
d.265.1d.66.1
:303 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   45->297 2istA PDBj 7e-32 30.4 %
:RPS:PDB   26->105 1dm9A PDBj 8e-10 18.8 %
:RPS:PDB   78->299 2apoA PDBj 5e-28 10.8 %
:RPS:SCOP  26->105 1dm9A  d.66.1.3 * 3e-10 18.8 %
:RPS:SCOP  86->302 1v9kA  d.265.1.3 * 3e-52 31.9 %
:HMM:SCOP  22->117 1c06A_ d.66.1.2 * 1.5e-05 26.0 %
:HMM:SCOP  75->300 1przA_ d.265.1.3 * 1.6e-68 38.7 %
:RPS:PFM   93->242 PF00849 * PseudoU_synth_2 2e-20 37.9 %
:HMM:PFM   92->243 PF00849 * PseudoU_synth_2 8.7e-38 31.6 152/164  
:BLT:SWISS 10->295 YHCT_BACSU 3e-51 36.0 %
:PROS 135->149|PS01129|PSI_RLU
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49882.1 GT:GENE ABO49882.1 GT:PRODUCT pseudouridine synthase, RluA family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1444338..1445249 GB:FROM 1444338 GB:TO 1445249 GB:DIRECTION + GB:PRODUCT pseudouridine synthase, RluA family GB:NOTE TIGRFAM: pseudouridine synthase, RluA family PFAM: pseudouridine synthase KEGG: dsy:DSY1290 hypothetical protein GB:PROTEIN_ID ABO49882.1 GB:DB_XREF GI:134051911 InterPro:IPR006145 InterPro:IPR006224 InterPro:IPR006225 LENGTH 303 SQ:AASEQ MENKCIIEKLQLIIPQTMDGWTVERVLRREVGVSRTLLRRAKRNRVILLNQLPVKTNVTVKTGEVLELWMGSQETQVVPERMELNILYEDAHLLAVNKPPGMLVHPLTNETSGTLANGVLYHWLQQGTIDRFRPVHRLDRNTSGIVLIARNPYVQQQLQIQMKQGQFVRRYLALVKGKVQPEQGVIQAPIALEEGSFIKRMISPAGKEAISHYQVLRTFNQASLVRVELETGRTHQVRVHMAHMGHPLLGDSLYGGDTSNIKRQALHCAYLAFNHPVQGSRIKISCSVAGDIRQLMEEHSKKA GT:EXON 1|1-303:0| BL:SWS:NREP 1 BL:SWS:REP 10->295|YHCT_BACSU|3e-51|36.0|286/302| PROS 135->149|PS01129|PSI_RLU|PDOC00869| SEG 155->166|qqqlqiqmkqgq| BL:PDB:NREP 1 BL:PDB:REP 45->297|2istA|7e-32|30.4|250/321| RP:PDB:NREP 2 RP:PDB:REP 26->105|1dm9A|8e-10|18.8|80/104| RP:PDB:REP 78->299|2apoA|5e-28|10.8|195/304| RP:PFM:NREP 1 RP:PFM:REP 93->242|PF00849|2e-20|37.9|145/149|PseudoU_synth_2| HM:PFM:NREP 1 HM:PFM:REP 92->243|PF00849|8.7e-38|31.6|152/164|PseudoU_synth_2| GO:PFM:NREP 4 GO:PFM GO:0001522|"GO:pseudouridine synthesis"|PF00849|IPR006145| GO:PFM GO:0003723|"GO:RNA binding"|PF00849|IPR006145| GO:PFM GO:0009451|"GO:RNA modification"|PF00849|IPR006145| GO:PFM GO:0009982|"GO:pseudouridine synthase activity"|PF00849|IPR006145| RP:SCP:NREP 2 RP:SCP:REP 26->105|1dm9A|3e-10|18.8|80/104|d.66.1.3| RP:SCP:REP 86->302|1v9kA|3e-52|31.9|213/227|d.265.1.3| HM:SCP:REP 22->117|1c06A_|1.5e-05|26.0|96/159|d.66.1.2|1/1|Alpha-L RNA-binding motif| HM:SCP:REP 75->300|1przA_|1.6e-68|38.7|225/252|d.265.1.3|1/1|Pseudouridine synthase| OP:NHOMO 2974 OP:NHOMOORG 1054 OP:PATTERN --------------------------------------11111------------------------- 2121131222221222223-41111222222121112222111111321111222211111111211221111111112111111222444414-311122223233424-2222222-211114111111111112222211131223233311222223213112222112111112111133311221433-3333333333333322333333333333223333334533333333333333333333-34344343334444444443333333333333333333333333333333333333333333333333332333333333333343333333334332332133141121212223132214333322222333222332322222222222223-323333332232233222222222334433333333333333333333333334222222222221122222222222222122133333222222223222222222222222222222222232225353554443344332225434444442222547142436223322124343443347777972433323333333333333333433332266654464774699999AA77799-A999A2-3233322122244444554444444444-44444444444444444444444444544444444444444445444444431544444444444222522222222233635555455454554445554354524436434444444-33434332222222226777566666667664533333333222222444422332223222242211112-21121221112122111122222222222242 -----23----12221111-1-1-----------------------1--1------1--1-122222311232222322322222111-22112211-1111121-12826343233-211131231214A3-32312114222112112321332132-12323214113-1112333E768-331141548751125 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 99.0 SQ:SECSTR ##ccTTccEEcHHHHHHHccEEHHHHHHTTTcccHHHHHHHHHTTcEEETTEEccTTcEEcccccEEETTEEEccccccGGGccHHHHHHTEEEEEEEcccccHHHccccTTcHHHHHHHHHHHHHTTcccEEEcccccTTcEEEEEEEEGGGGGGGGGTTcccccHHEEEEEEEEEcccccHHHHHHHHEEEcHHHHHHcEEEEcccEEEEEEEEEEEEETTEEEEEEEEcTTccHHHHHHHHHHHTTccEEEEEEEEEEEEEEETTEEGGGcccHHHHHHHHHHHHTccccHHHHHHcEE# DISOP:02AL 1-6,303-304| PSIPRED cccccccEEEEEEEccccccccHHHHHHHcccccHHHHHHHHHcccEEEccEEEccccEEccccEEEEEccccccccccccccEEEEEEcccEEEEEccccEEEccccccccccHHHHHHHHHHHccccccEEEEEEccccccEEEEEEccHHHHHHHHHHHHHccEEEEEEEEEEEEEcccEEEEEcccEEcccccEEEEEEccccccccEEEEEEEEccEEEEEEEEcccccHHHHHHHHHccccEEccccccccccccccEEEEEEEEEEcccccccEEEEEccccHHHHHHHHHHcccc //