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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49888.1
DDBJ      :             WD40 domain protein beta Propeller
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  5/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.68.7b.70.3
:489 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   183->406 2w8bA PDBj 7e-08 30.9 %
:RPS:PDB   177->358 1c5kA PDBj 4e-15 22.3 %
:RPS:SCOP  265->335 1k32A2  b.68.7.1 * 6e-06 27.3 %
:HMM:SCOP  118->471 1orvA1 b.70.3.1 * 6.6e-16 24.5 %
:HMM:PFM   299->317 PF07676 * PD40 1.9e-05 47.4 19/39  
:HMM:PFM   142->289 PF10647 * Gmad1 1.4e-06 24.0 104/253  
:BLT:SWISS 141->349 TOLB_ROSDO 3e-11 25.8 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49888.1 GT:GENE ABO49888.1 GT:PRODUCT WD40 domain protein beta Propeller GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1450319..1451788 GB:FROM 1450319 GB:TO 1451788 GB:DIRECTION + GB:PRODUCT WD40 domain protein beta Propeller GB:NOTE PFAM: WD40 domain protein beta Propeller KEGG: sus:Acid_1954 amidohydrolase GB:PROTEIN_ID ABO49888.1 GB:DB_XREF GI:134051917 InterPro:IPR011659 LENGTH 489 SQ:AASEQ MTEERHHEPDNKVLPFENYLKVKEEWEDDISQLLTHMRQVREAVPVNRRLQVELRKKLLSRQKEIMNQNGIVTSPEEATKRKIAQTGLWQSRLAPFLGVLAAIFIVMSLTCLWRYANGQYHLEVTGSPQEITRFWTEDAPLQPAVSPDGTKILVVRGGSLVLLSHTGVQLAYLEPPEGATFQSPTWSPNGEQISFVFSQQGKEEIRQLAAEKIITATKMSNVYSQTTARGAEKKGQEAKDSLQTFAGKKLKAADLNHKSIHFSNLVYSPDGNRLAYVMGRIGEPTEVWVRYSNGEEKRITNGDAPTWSPNGKYLVVQRPGKSKTYDLWLVNVETGGADLLGPGENPTWSKNGYLAFNTVIVQERVLTFLPNGDPQYTVRQQVAEGRSTYLGEDGSTVLKQLKEGEGWLATSHLLIAPENRISGVELSWLRQQELSGTLEPKTLVLNEISKCEGQVFGPDDKWLLYARRDGDTVALLKLRLGEQWEKERN GT:EXON 1|1-489:0| BL:SWS:NREP 1 BL:SWS:REP 141->349|TOLB_ROSDO|3e-11|25.8|209/443| TM:NTM 1 TM:REGION 93->115| SEG 153->164|lvvrggslvlls| BL:PDB:NREP 1 BL:PDB:REP 183->406|2w8bA|7e-08|30.9|178/409| RP:PDB:NREP 1 RP:PDB:REP 177->358|1c5kA|4e-15|22.3|179/397| HM:PFM:NREP 2 HM:PFM:REP 299->317|PF07676|1.9e-05|47.4|19/39|PD40| HM:PFM:REP 142->289|PF10647|1.4e-06|24.0|104/253|Gmad1| RP:SCP:NREP 1 RP:SCP:REP 265->335|1k32A2|6e-06|27.3|66/281|b.68.7.1| HM:SCP:REP 118->471|1orvA1|6.6e-16|24.5|265/0|b.70.3.1|1/1|DPP6 N-terminal domain-like| OP:NHOMO 5 OP:NHOMOORG 5 OP:PATTERN -------------------------------------------------------------------- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 229 STR:RPRED 46.8 SQ:SECSTR ################################################################################################################################################################################EcccEEEEEEcTTccEEEEEEcTTcccEEEETTcEEEEEcccccEEEEEEcTTcEEcTTcccEEEEEETTTccEEEc#ccccccEEEEEEEcTTccEEEEEEcTTcccEEEEEETTccccEEccccccEEEcTTccEEEEEEEETTEEEEEEEEETTTccEEEccccEEEEEcTTcEEEEEEcTTccEEEEEEEETTEEEEEEEETTTcccccccETccEEEEEEEETTE################################################################################### DISOP:02AL 1-8,485-490| PSIPRED ccccccccccccEEEcHHEEEcccHHccccHHEEEEEEEEccccccccEEEEEEEEEEEccccEEEEEEEEEccHHHHHcEEEcccEEEEEEEcccccEEEEEEEEEEEEEcccccccEEEEEEEcccccEEEEEcccEEEEEEEcccccEEEEEEcccEEEEEcccccEEEEEcccccEEEEEEEcccccEEEEEEcccccEEEEEEEccccEEEEEEEEEcccccccEEEEcccccEEEEEEEcccccEEEEccccccEEEEEEEcccccEEEEEEcccccEEEEEEEcccccEEEEEEccccEEcccccEEEEEEccccccEEEEEEEcccccEEEEccccccEEcccccEEEEEEccccEEEEEEEcccccEEEEEEcccccEEEEEEcccEEEEEEEEcccccccEEEEEccccccEEEEEEEEcccEEEEEEcccEEEEEEEcccccEEEcccccEEEEEEccccEEEEEEEccccEEEcccc //