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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49916.1
DDBJ      :             glycosyl transferase, family 2
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  313/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
a.118.8c.68.1d.157.1
:657 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->82 2z87B PDBj 8e-04 35.4 %
:BLT:PDB   202->345 2fo7A PDBj 8e-07 31.0 %
:RPS:PDB   1->95 3ckqA PDBj 3e-12 25.3 %
:RPS:PDB   166->409 2cg3A PDBj 4e-12 8.8 %
:RPS:PDB   570->647 2cg2A PDBj 3e-06 3.6 %
:RPS:SCOP  1->133 1omxA  c.68.1.15 * 1e-13 12.0 %
:RPS:SCOP  166->302 2cfuA2  d.157.1.13 * 7e-12 8.3 %
:RPS:SCOP  570->647 2fbnA1  a.118.8.1 * 3e-04 16.9 %
:HMM:SCOP  1->147 1omzA_ c.68.1.15 * 7.6e-27 30.0 %
:HMM:SCOP  195->355 2c2lA1 a.118.8.1 * 3.7e-18 25.5 %
:HMM:SCOP  311->445 1y8mA1 a.118.8.1 * 0.0003 25.0 %
:HMM:SCOP  380->631 1e96B_ a.118.8.1 * 2.5e-08 26.2 %
:RPS:PFM   10->95 PF00535 * Glycos_transf_2 2e-11 46.5 %
:RPS:PFM   175->269 PF04733 * Coatomer_E 9e-04 29.7 %
:HMM:PFM   3->135 PF00535 * Glycos_transf_2 4.7e-24 29.3 133/169  
:HMM:PFM   199->226 PF07719 * TPR_2 9.4e-05 39.3 28/34  
:HMM:PFM   271->299 PF07719 * TPR_2 8.1e-06 34.5 29/34  
:HMM:PFM   319->338 PF07719 * TPR_2 0.00032 35.0 20/34  
:HMM:PFM   571->603 PF07719 * TPR_2 0.00041 30.3 33/34  
:BLT:SWISS 2->226 Y270_SYNE7 2e-34 41.1 %
:BLT:SWISS 205->399 Y1345_METJA 2e-06 29.8 %
:BLT:SWISS 392->514 MTMU_MYCSP 4e-04 23.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49916.1 GT:GENE ABO49916.1 GT:PRODUCT glycosyl transferase, family 2 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(1490311..1492284) GB:FROM 1490311 GB:TO 1492284 GB:DIRECTION - GB:PRODUCT glycosyl transferase, family 2 GB:NOTE PFAM: glycosyl transferase, family 2; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein SMART: Tetratricopeptide domain protein KEGG: tte:TTE0501 glycosyltransferase involved in cell wall biogenesis GB:PROTEIN_ID ABO49916.1 GB:DB_XREF GI:134051945 InterPro:IPR001173 InterPro:IPR001440 InterPro:IPR013026 InterPro:IPR013105 LENGTH 657 SQ:AASEQ MISLCMIVKNEERNLARCLNSAKDCVDEIIIVDTGSVDNTVNIAKKFDAKIYTYQWDEDFAAARNFSLSKAAGDWILYLDADEELEANCCQRLRALSNLPQYEAYYFQIINLTDGNDPLKHLNIRMFKNKPEYRFEGKLHEQIISSISAASPNQPPVVNSGITILHYGYLASEFIAKDKAQRNYRINKALVDKEPNNPFYLYTLGGSCVNLNDLEGATNYYLKALKNVSLQAMYAPSIFISLITCLLKIGKIVEAAEYIEKCKTHYPDYVDIHFIEGELYKRLGHVSRAILCFEKCLQLGEQKISKYTTRTGVGSFMPLFELAQIYIDQGDLKKALDYQIMGLKLKNNDMKQYLTLAKILKTALGNGQIVYKILKANIKHADKTAEKFILARMLYQIEEYELAGKLFDKIPVKSEEVAYYKCLYFIKTARHNEVTQTLKQINNIALYHDVLQELILAHWNSSPPLDASIYLEQQTDPDQELIKILSYINDRLFNCPTTCKFDINSEAFLLIMNKLLATKGFKLANDVLSLAGLDTTESKITYLSNSNLNNEKLELAARLALQELKQGSTHPDYYYVLGLYFLNNEDLESAHNMIHQALAILPEADQYQRLLKTIYRKQALQMVLKALENYPHNPRFNNCLIHLQKDLMTDTRLKGGH GT:EXON 1|1-657:0| BL:SWS:NREP 3 BL:SWS:REP 2->226|Y270_SYNE7|2e-34|41.1|219/403| BL:SWS:REP 205->399|Y1345_METJA|2e-06|29.8|191/314| BL:SWS:REP 392->514|MTMU_MYCSP|4e-04|23.1|117/233| TM:NTM 1 TM:REGION 232->254| SEG 543->566|lsnsnlnneklelaarlalqelkq| BL:PDB:NREP 2 BL:PDB:REP 18->82|2z87B|8e-04|35.4|65/591| BL:PDB:REP 202->345|2fo7A|8e-07|31.0|126/136| RP:PDB:NREP 3 RP:PDB:REP 1->95|3ckqA|3e-12|25.3|95/302| RP:PDB:REP 166->409|2cg3A|4e-12|8.8|228/617| RP:PDB:REP 570->647|2cg2A|3e-06|3.6|78/629| RP:PFM:NREP 2 RP:PFM:REP 10->95|PF00535|2e-11|46.5|86/148|Glycos_transf_2| RP:PFM:REP 175->269|PF04733|9e-04|29.7|91/285|Coatomer_E| HM:PFM:NREP 5 HM:PFM:REP 3->135|PF00535|4.7e-24|29.3|133/169|Glycos_transf_2| HM:PFM:REP 199->226|PF07719|9.4e-05|39.3|28/34|TPR_2| HM:PFM:REP 271->299|PF07719|8.1e-06|34.5|29/34|TPR_2| HM:PFM:REP 319->338|PF07719|0.00032|35.0|20/34|TPR_2| HM:PFM:REP 571->603|PF07719|0.00041|30.3|33/34|TPR_2| GO:PFM:NREP 4 GO:PFM GO:0005198|"GO:structural molecule activity"|PF04733|IPR006822| GO:PFM GO:0005515|"GO:protein binding"|PF04733|IPR006822| GO:PFM GO:0006890|"GO:retrograde vesicle-mediated transport, Golgi to ER"|PF04733|IPR006822| GO:PFM GO:0030126|"GO:COPI vesicle coat"|PF04733|IPR006822| RP:SCP:NREP 3 RP:SCP:REP 1->133|1omxA|1e-13|12.0|133/250|c.68.1.15| RP:SCP:REP 166->302|2cfuA2|7e-12|8.3|133/502|d.157.1.13| RP:SCP:REP 570->647|2fbnA1|3e-04|16.9|78/153|a.118.8.1| HM:SCP:REP 1->147|1omzA_|7.6e-27|30.0|140/0|c.68.1.15|1/1|Nucleotide-diphospho-sugar transferases| HM:SCP:REP 195->355|2c2lA1|3.7e-18|25.5|157/0|a.118.8.1|1/2|TPR-like| HM:SCP:REP 311->445|1y8mA1|0.0003|25.0|100/0|a.118.8.1|2/3|TPR-like| HM:SCP:REP 380->631|1e96B_|2.5e-08|26.2|130/0|a.118.8.1|2/2|TPR-like| OP:NHOMO 400 OP:NHOMOORG 316 OP:PATTERN ---------------------------------1--------------------------1------- 11-11-----------------------------------------------------------------------------121123---1---------31-1-1-----------------1-----1--1--11111---111112222--11111112113-2322-1-----1---------1-12222231311141111111-1111113-1-21--11111125--------------------1-----------1------1---------------------------------------------------21122221323231-233----3-----11--22-8311-1---11-11-1-----------------------------------11-11-11-1-------------------------------------1------1------------1111-11111111----1-----11111-----------11----------11--111332-11---21--111-----111111111-----1-11-1-----1----11112---111-1-112111-111111--1---------1--111111------1-----1-1--------1-1--1-----------1-1-1-------------------------------12111-1-----------------1---------111111111111---1-----1111--1-1111111111111111111111111------------------------------21111111111-1111111111111111--1-112222------------------------------------1-11111111-2- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 578 STR:RPRED 88.0 SQ:SECSTR cEEEEEEEcccTTTHHHHHHHHGGGcTEEEEEEcccccTHHHHHHTTTcHcTTccccccHHHHHHHHHHHccccEEEEccccccccTTHHHHHHHTcccEEEccEEEETTEEEEEEEEETTEEEEEEccccTTcTccccGccTTccccccTTTcHHHHHTTccTTTTTHHHHccccHHHHTcGGGccccccHHHHHHHHHHHHHccccccGGGTccccHHHHHHHHHHcTHHHTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHTTccEEEcHHEEccccccccHHHHHHcHHHHHHHHHHHccHHHHTTccEEEEEEETTTTEEEEEEEETcccTTccEEEEccHHHHHHHHTTcccHHHHHHTTccHcTTcHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHccccTHHHHHHHHHHHTTcHHHHTTTTcccccccHHHHTTcTTcHHHHHHHHHHHH#####################################################################cHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHcTTcHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccccccHHHH########## DISOP:02AL 655-658| PSIPRED cEEEEEEEccHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHccccEEEccccccHHHHHHHHHHHccccEEEEccccccccHHHHHHHHHHHHccccEEEEEEccEEEccccEEEEccHHHHcccccccccccHHHHHHHHHHHcccccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccc //