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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO49986.1
DDBJ      :             glucose-1-phosphate adenylyltransferase, GlgD subunit
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  413/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
b.81.1c.68.1
:371 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->336 1yp3A PDBj 2e-19 29.2 %
:RPS:PDB   17->277 3bmaA PDBj 9e-21 10.9 %
:RPS:SCOP  17->276 1yp2A2  c.68.1.6 * 7e-37 25.5 %
:RPS:SCOP  281->356 2f9cA1  b.81.1.7 * 2e-07 19.7 %
:HMM:SCOP  17->320 1yp2A2 c.68.1.6 * 1.5e-49 27.9 %
:HMM:PFM   17->149 PF00483 * NTP_transferase 9e-13 23.1 121/248  
:HMM:PFM   284->339 PF04519 * DUF583 3.3e-06 26.8 56/95  
:HMM:PFM   165->179 PF10049 * DUF2283 0.001 53.3 15/50  
:BLT:SWISS 4->367 GLGD_BACSU 1e-73 42.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO49986.1 GT:GENE ABO49986.1 GT:PRODUCT glucose-1-phosphate adenylyltransferase, GlgD subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1582549..1583664 GB:FROM 1582549 GB:TO 1583664 GB:DIRECTION + GB:PRODUCT glucose-1-phosphate adenylyltransferase, GlgD subunit GB:NOTE KEGG: bha:BH1086 required for glycogen biosynthesis TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit PFAM: Nucleotidyl transferase GB:PROTEIN_ID ABO49986.1 GB:DB_XREF GI:134052015 InterPro:IPR005835 InterPro:IPR011832 LENGTH 371 SQ:AASEQ MKNVMGIINIMENEDFLMELSYHRPVAAVPFGGRYRMIDFVLSNMVNSGIQNVGILVQNSYRALMDHLGRGKEWDLDRKRDGLFFLPPDQYNGQGIYRWDLRHFYTHLDYINYSRHKYVLISGSNMLCNINYQEAFEFHQAMNADITLIYKDMESIRDNLPQSSFIDIAEDGRIFGLEISPTKINSFKMSMEMCLMKKSLLVDLINCCYSRGECDLIRDGFIKNLHRLRVYGFPYQGYLATIDNIQSYYKHSMDLLKPEIWRKLFFEQGLIYTKPKDGAPTKYNEGARVSNALIANDCIIDGFVENSIIFRGVKIGRGAHVKDSIIMQKCDIQEDAVIESVIADKEVIVTKVKHLKGEKHYPLVIKKRTII GT:EXON 1|1-371:0| BL:SWS:NREP 1 BL:SWS:REP 4->367|GLGD_BACSU|1e-73|42.7|328/343| BL:PDB:NREP 1 BL:PDB:REP 2->336|1yp3A|2e-19|29.2|322/433| RP:PDB:NREP 1 RP:PDB:REP 17->277|3bmaA|9e-21|10.9|258/392| HM:PFM:NREP 3 HM:PFM:REP 17->149|PF00483|9e-13|23.1|121/248|NTP_transferase| HM:PFM:REP 284->339|PF04519|3.3e-06|26.8|56/95|DUF583| HM:PFM:REP 165->179|PF10049|0.001|53.3|15/50|DUF2283| RP:SCP:NREP 2 RP:SCP:REP 17->276|1yp2A2|7e-37|25.5|251/293|c.68.1.6| RP:SCP:REP 281->356|2f9cA1|2e-07|19.7|76/320|b.81.1.7| HM:SCP:REP 17->320|1yp2A2|1.5e-49|27.9|258/0|c.68.1.6|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 640 OP:NHOMOORG 428 OP:PATTERN -------------------------------------------------------------------- 112--11-111---1--11-1-1111111111-11111111---111-111-1-122-----11----1---111---2--21---11-------------1------1-1111111111----1-----------22222---2111-1111-1---11---11-1---1------------21211-11-2-222221222222222-222-2222--2-222-------32--------------------2--22-----22--22-2----212122222222222222222222-------------223---112222-22-------2-2222222-2--222-24--2222--22-----2221112----------1111---11111---------------------1--111111111111------1111111----------1---1111-------------------------------1---------------------11--------1---------1-1---1-11---12111---------111111--3------------1-111----111112-1-------------------------11332111--3-411111-1-111111-11-----1221------11112111111111111-111111111111111111111111---11-111111111111111111111--2111111-1111-------------1---1111111-1---1111-----------2-----------------1-111111-111112222222222----------------1111------------1-1----------------2--------2222222222-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------212S11111B577-65------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 366 STR:RPRED 98.7 SQ:SECSTR GGGGEEEEEEccccGGHHHHHcHHHHHHHHTcccccEEEEHHHHHTTcccEEEEEEccTTccHHHHHHHHTTcHHHHTTcEEEEEccGGGcccccHHHHTTTccHHHHHHHHHccccHHHHHHHHHcTTcTTHHHHHHHcccHHHHHHHHHHHHHHHHHHHGTTcTTTTHHHHHTTTTTcTTccccccccccHHHHHHHTGGGHHHHTTTTTTccccccTHHHHHHHHEEEEccccHHHHHTTccHHHHHHHHHHHHHHHHTTTcccEEEcTTcTTcEEccccccccEEEccEEccccEEEcEEEccEEcTTcEEcTTcEEEEEEEcTTcEEcTTcEEEEEEEcTTcEETTcEEEccccccEEEcT##### DISOP:02AL 1-2| PSIPRED cccEEEEEEcccccccccHHHcccccHHEEEccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHccccccccEEEEEEcccccccccccccHHHHHHHHHHHHcccccEEEEEcccccccccHHHHHHHHHHccccEEEEEEEccccccccccccEEEEcccccEEEEEEccccccccEEEEEEEEEcHHHHHHHHHHcccccccHHHHHHHHHHHccccEEEEEEccHHHHHccHHHHHHHHHHHHccccccEEEcccccEEcccccccccEEccccEEEEEEEccccEEEEEEEEEEEccccEEccccEEEEEEEccccEEccccEEEEEEEccccEEccccEEcccccccEEccccccc //