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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50067.1
DDBJ      :             electron transfer flavoprotein beta-subunit
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  543/915 : Eukaryota  168/199 : Viruses  0/175   --->[See Alignment]
c.26.2c.31.1d.58.1
:439 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->53 1clfA PDBj 4e-09 39.2 %
:BLT:PDB   102->293 3ih5C PDBj 1e-30 43.4 %
:RPS:PDB   2->55 1clfA PDBj 2e-09 37.7 %
:RPS:PDB   102->423 3clsD PDBj 2e-46 26.7 %
:RPS:SCOP  2->53 1durA  d.58.1.1 * 6e-11 34.0 %
:RPS:SCOP  102->295 1o94D  c.26.2.3 * 1e-31 19.8 %
:RPS:SCOP  304->423 1efpA2  c.31.1.2 * 1e-43 56.3 %
:HMM:SCOP  1->62 2fug91 d.58.1.5 * 1.1e-15 38.7 %
:HMM:SCOP  100->298 1o97D1 c.26.2.3 * 1.5e-55 39.6 %
:HMM:SCOP  301->423 1o97D2 c.31.1.2 * 2.4e-45 56.6 %
:RPS:PFM   105->259 PF01012 * ETF 3e-22 40.9 %
:RPS:PFM   301->386 PF00766 * ETF_alpha 9e-26 60.0 %
:HMM:PFM   101->263 PF01012 * ETF 3e-49 40.3 159/164  
:HMM:PFM   302->387 PF00766 * ETF_alpha 2e-35 54.1 85/86  
:HMM:PFM   5->24 PF00037 * Fer4 1.2e-07 40.0 20/24  
:HMM:PFM   33->54 PF00037 * Fer4 3.9e-10 59.1 22/24  
:BLT:SWISS 1->55 FER_METTE 7e-10 40.0 %
:BLT:SWISS 99->426 ETFA_CLOTS 9e-92 51.2 %
:PROS 9->20|PS00198|4FE4S_FER_1
:PROS 39->50|PS00198|4FE4S_FER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50067.1 GT:GENE ABO50067.1 GT:PRODUCT electron transfer flavoprotein beta-subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1669554..1670873 GB:FROM 1669554 GB:TO 1670873 GB:DIRECTION + GB:PRODUCT electron transfer flavoprotein beta-subunit GB:NOTE PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; 4Fe-4S ferredoxin, iron-sulfur binding domain protein KEGG: dsy:DSY1628 hypothetical protein GB:PROTEIN_ID ABO50067.1 GB:DB_XREF GI:134052096 InterPro:IPR000049 InterPro:IPR001308 InterPro:IPR001450 LENGTH 439 SQ:AASEQ MAVKVSSACMGCQACITSCPHEALFMNDAGVCQVIPEKCVDCGECVEVCPVEALSSPKNTEEPAPITTPAKEVCMEQSTANQTNPAQEVAQLEGELGRYKGVWVFIEQREGHIAPVSLELLGAGRQLADKLGVELAGVLLGYNLSGLEASLYEYGADKVYLVDHPVLCYYRTETYMQVVGKLVQEYLPEIVLMGATTTGRDLAGAVATELATGLTADCTVLDIDQAKRLLLATRPAFGGNIMATIVAKKHRPQMATVRPKVMKMGDPVPGRQGVLVKPEVSLQEENLLTRVLEIVQEYGEQANLQDAEIIVAGGRGLGDKESFHKICGSLAEAIGGKVGGTRAAVEAGWLEQKYQVGQTGVTVAPKLYFALGISGAIQHLVGIRGSDIIIAINSDPEAPIFQECTYGIVGDALKIVPNLIKPLQVLLKDKGKKGGICCA GT:EXON 1|1-439:0| BL:SWS:NREP 2 BL:SWS:REP 1->55|FER_METTE|7e-10|40.0|55/58| BL:SWS:REP 99->426|ETFA_CLOTS|9e-92|51.2|326/330| PROS 9->20|PS00198|4FE4S_FER_1|PDOC00176| PROS 39->50|PS00198|4FE4S_FER_1|PDOC00176| BL:PDB:NREP 2 BL:PDB:REP 2->53|1clfA|4e-09|39.2|51/55| BL:PDB:REP 102->293|3ih5C|1e-30|43.4|189/209| RP:PDB:NREP 2 RP:PDB:REP 2->55|1clfA|2e-09|37.7|53/55| RP:PDB:REP 102->423|3clsD|2e-46|26.7|315/318| RP:PFM:NREP 2 RP:PFM:REP 105->259|PF01012|3e-22|40.9|149/157|ETF| RP:PFM:REP 301->386|PF00766|9e-26|60.0|85/86|ETF_alpha| HM:PFM:NREP 4 HM:PFM:REP 101->263|PF01012|3e-49|40.3|159/164|ETF| HM:PFM:REP 302->387|PF00766|2e-35|54.1|85/86|ETF_alpha| HM:PFM:REP 5->24|PF00037|1.2e-07|40.0|20/24|Fer4| HM:PFM:REP 33->54|PF00037|3.9e-10|59.1|22/24|Fer4| RP:SCP:NREP 3 RP:SCP:REP 2->53|1durA|6e-11|34.0|50/55|d.58.1.1| RP:SCP:REP 102->295|1o94D|1e-31|19.8|187/189|c.26.2.3| RP:SCP:REP 304->423|1efpA2|1e-43|56.3|119/124|c.31.1.2| HM:SCP:REP 1->62|2fug91|1.1e-15|38.7|62/0|d.58.1.5|1/1|4Fe-4S ferredoxins| HM:SCP:REP 100->298|1o97D1|1.5e-55|39.6|192/0|c.26.2.3|1/1|Adenine nucleotide alpha hydrolases-like| HM:SCP:REP 301->423|1o97D2|2.4e-45|56.6|122/0|c.31.1.2|1/1|DHS-like NAD/FAD-binding domain| OP:NHOMO 1213 OP:NHOMOORG 743 OP:PATTERN 22----2222222222-22322222112-111------------1---1------------3322--- 1232211111111111111-11111111111111111122111111-11---111112--11211111121--------152------11111122---111111111-1---------------1111111112111122---12-------11-----------1----------------11111--112111111-1111111111111111111131111------21----------------------1-------------------------------------------------------------------1532555555554541433422215-3-1-12-974463-141--11-3-12-11111111132222111222221111111111112222242212113112334335233411111111111112222222222212322-----------------------------1121113321222233422222223722221245612121112261222231213111-112111111111---14115432--1-------7471915--11211114-------------------------1111-1112121-1111111311112132121-----1-------2-1-1--3222333332-2333333333233333331-------13231333332313113-2212222-----------------1111111111-1124---------------11111111114122222222222221223-------------1-----11-1111111111111111--12111111----------1-------------------------11111121111-- ----111-211-11111111111111111111111111111111111-111111111-1111111111--1111111111111111-1-12111111111111112-12121211-11-11-1111-2-231-12211--1-11111-1-11-2121-11211211121131111111-----1111321111121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 424 STR:RPRED 96.6 SQ:SECSTR #cccccTTcccccTTTTTcTTccEEEccccEEEEcTTTcccccTTTTTcTTccccETTTccHHHHHHHEcccccccccEEEcccccEEEcGGGHHHHcccEEEEEccEETTEEcTHHHHHHHHHHHHcccTTcEEEEEEEcTTGGGGHHHHccTTccEEEEEEccccccccHHHHHHHHHHHHHHHcccEEEEEccHHHHTTHHHHHHHcccEEEEEEcEEEEEEETTEEEEEEEETTTTEEEEEccTTcccEEEEEcTTcccccccccccEEEEEEccccccccccccccccccccccccccTTcccEEEEEcGGGccGGGHHHHHHHHHHHHTcEEEEcHHHHHTTcccGGGcccccccccTccEEEEEcccccHHHHHHHTTccEEEEEcccTTcGGGGTccEEEcccHHHHHHHHHHHcTc############## DISOP:02AL 268-273| PSIPRED cEEEEcccccccccHHHHcccccEEEccccEEEEcHHHcccccccHHHcccccEEcccccccccccccccccccccccccccccccccccHHHHHHHccccEEEEEEccccEEcHHHHHHHHHHHHHHHHHccEEEEEEEcccHHHHHHHHHHccccEEEEEEcHHHccccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHccccEEEEEEEEEEccccEEEEEEEccccEEEEEEEEccccEEEEEEccccccccccccccccEEEEEEcccccccccEEEEEEEEcccccccHHHccEEEEcccccccHHHHHHHHHHHHHHHccEEEccHHHHHcccccHHHEEcccccEEccEEEEEEEEcccHHHHHccccccEEEEEEccccccHHccccEEEEccHHHHHHHHHHHHHHHHHHccccEEEEcc //