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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50134.1
DDBJ      :             Serine-type D-Ala-D-Ala carboxypeptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  690/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
b.105.1e.3.1
:388 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->377 1nj4A PDBj 6e-34 31.8 %
:RPS:PDB   32->292 2bcfA PDBj 6e-33 24.6 %
:RPS:SCOP  32->286 1hd8A2  e.3.1.1 * 1e-63 35.8 %
:RPS:SCOP  290->379 1hd8A1  b.105.1.1 * 2e-14 22.2 %
:HMM:SCOP  4->289 1tvfA2 e.3.1.1 * 7.7e-70 41.0 %
:HMM:SCOP  281->379 1xp4A1 b.105.1.1 * 2.4e-17 34.8 %
:RPS:PFM   33->273 PF00768 * Peptidase_S11 3e-48 48.7 %
:RPS:PFM   292->379 PF07943 * PBP5_C 3e-10 33.0 %
:HMM:PFM   28->272 PF00768 * Peptidase_S11 7.8e-64 39.1 230/241  
:HMM:PFM   294->379 PF07943 * PBP5_C 1.4e-17 36.0 86/91  
:BLT:SWISS 35->309 DACB_BACSU 3e-44 40.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50134.1 GT:GENE ABO50134.1 GT:PRODUCT Serine-type D-Ala-D-Ala carboxypeptidase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1745534..1746700 GB:FROM 1745534 GB:TO 1746700 GB:DIRECTION + GB:PRODUCT Serine-type D-Ala-D-Ala carboxypeptidase GB:NOTE PFAM: peptidase S11, D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase GB:PROTEIN_ID ABO50134.1 GB:DB_XREF GI:134052163 InterPro:IPR001967 InterPro:IPR012907 LENGTH 388 SQ:AASEQ MNQKRIIIIFLSLLSIFLLLPGTLWAETQGKPPKVKASAASLMEVESGKVYFEKDGDKRREPASLTKVMTAILAIEKGNLKDVVTVQQRAARVSMGQDIGLNIGDRLYLEDLLKAALMYSANDSTVAIGEHIGGSHDQFVKMMNEKAVALGLKNTHFANTNGFHHPNHYTTANDLAKLTCYALQNKTFAEFVRTKEATITWLPKETAVKTGKKSEAETVKQRVLRNTNRLLRSDFEGINGVKTGTTPRAGNCLIASATREGRQLVVVILHSNNRWNDATRLLEYGFNEVKPVVLVEKDEVLSTMPVLEGVENKITLVTAKKLEVYVPSVDMDKIERKIHLKPTPMAPVKQGTKLGQAIFTVKGKEIASVDLVANQNIERLPWYKRIFN GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 35->309|DACB_BACSU|3e-44|40.9|252/382| TM:NTM 1 TM:REGION 6->26| SEG 6->20|iiiiflsllsiflll| BL:PDB:NREP 1 BL:PDB:REP 33->377|1nj4A|6e-34|31.8|321/343| RP:PDB:NREP 1 RP:PDB:REP 32->292|2bcfA|6e-33|24.6|236/255| RP:PFM:NREP 2 RP:PFM:REP 33->273|PF00768|3e-48|48.7|224/235|Peptidase_S11| RP:PFM:REP 292->379|PF07943|3e-10|33.0|88/91|PBP5_C| HM:PFM:NREP 2 HM:PFM:REP 28->272|PF00768|7.8e-64|39.1|230/241|Peptidase_S11| HM:PFM:REP 294->379|PF07943|1.4e-17|36.0|86/91|PBP5_C| GO:PFM:NREP 4 GO:PFM GO:0006508|"GO:proteolysis"|PF00768|IPR001967| GO:PFM GO:0009002|"GO:serine-type D-Ala-D-Ala carboxypeptidase activity"|PF00768|IPR001967| GO:PFM GO:0006508|"GO:proteolysis"|PF07943|IPR012907| GO:PFM GO:0009002|"GO:serine-type D-Ala-D-Ala carboxypeptidase activity"|PF07943|IPR012907| RP:SCP:NREP 2 RP:SCP:REP 32->286|1hd8A2|1e-63|35.8|226/243|e.3.1.1| RP:SCP:REP 290->379|1hd8A1|2e-14|22.2|90/94|b.105.1.1| HM:SCP:REP 4->289|1tvfA2|7.7e-70|41.0|266/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| HM:SCP:REP 281->379|1xp4A1|2.4e-17|34.8|92/0|b.105.1.1|1/1|Penicillin-binding protein associated domain| OP:NHOMO 1648 OP:NHOMOORG 694 OP:PATTERN -------------------------------------------------------------------- 1--14111111-1-21122-231122222222333311111111-------1--------21--111434--------11211---------------------------111111111111111111-11111-1---------4---------------------------------------------433777779988877998444433789333442222222244-1111111111111111-211131111-111221111121-111112223332211111111111112333333332333211111111334344444444443444554444545225342366554234333333-12-1-111123333333333333333344444343444-333333334422444455455544332222222222222222222222222232211111111----11111111111111111111211222233333333444433325555343322122112222222222242222232222222222221122221-----1-22-111-1-1---1--------121--------------------1---33332121111112222222122221211211--11111------44334444444434443-44544444444444444434443322244434444444242345234322321333333333333--11111111111212212122-11222111-13333333222212222221222222222211111111111114333333322222111111111111111-------111111111-------------------------------------212 --------------------------------------------------------------------------------------------------------------------------------------------------------------1------1-------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 353 STR:RPRED 91.0 SQ:SECSTR ########################HHHHHHHcccccccEEEEEETTTcEEEEEEcTTcccccGGGHHHHHHHHHHHHccTTcEEEccTGGGccccccTccccTTcEEEHHHHHHHHHHcccHHHHHHHHHTTcHHHHHHHHHHHHHHHHHTcTTccccccccccTccccccHHHHHHHHHHHHcHHHHHHHHccEEEccHHEEEEEETTccEEEEcHTHccEEEEcccTHHHHcTTTEEEEEEEEETTTEEEEEEEEEETTEEEEEEEEccccHHHHHHHHHHHHHHccTTcEEEHHHHcTTcccccTTTTTTHHHHHHHHHHHHHHHHcTTTTccccccccTTEEEEETTTccccEEEEccccEEEEEEEEEcccc########### DISOP:02AL 1-3| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEcccccEEEEEccccccccHHHHHHHHHHHHHHccccccEEEccHHHHccccccEEEEccccEEEHHHHHHHHHHHccHHHHHHHHHHHcccHHHHHHHHHHHHHHccccccEEccccccccccccccHHHHHHHHHHHHHcccHHHHHccHHHHcccccccccccccccEEcccccEEEEEEEccccccccccEEEEEEEcccccccEEEEEEEEccEEEEEEEEccccHHHHHHHHHHHHHcccEEEEEEccccEEEEEEcccccccEEEEEEcccEEEEEEccccccEEEEEEEccccccccccccEEEEEEEEEccEEEEEEEEEEccccccccHHHHHHc //