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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50174.1
DDBJ      :             penicillin-binding protein, 1A family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  830/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
d.2.1e.3.1
:828 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->673 3dwkB PDBj 1e-75 36.6 %
:RPS:PDB   51->677 3dwkB PDBj e-105 31.7 %
:RPS:SCOP  49->293 2oluA1  d.2.1.10 * 5e-63 41.3 %
:RPS:SCOP  267->671 2bg1A1  e.3.1.1 * 4e-68 24.5 %
:HMM:SCOP  245->725 2bg1A1 e.3.1.1 * 8e-121 41.2 %
:RPS:PFM   63->263 PF00912 * Transgly 4e-43 51.7 %
:RPS:PFM   360->638 PF00905 * Transpeptidase 4e-34 41.6 %
:HMM:PFM   62->224 PF00912 * Transgly 3e-62 46.6 161/178  
:HMM:PFM   359->639 PF00905 * Transpeptidase 1.2e-37 30.6 271/304  
:BLT:SWISS 35->693 PBPA_BACSU e-103 41.5 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50174.1 GT:GENE ABO50174.1 GT:PRODUCT penicillin-binding protein, 1A family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(1798596..1801082) GB:FROM 1798596 GB:TO 1801082 GB:DIRECTION - GB:PRODUCT penicillin-binding protein, 1A family GB:NOTE TIGRFAM: penicillin-binding protein, 1A family PFAM: glycosyl transferase, family 51; penicillin-binding protein, transpeptidase KEGG: chy:CHY_1563 penicillin-binding protein, 1A family GB:PROTEIN_ID ABO50174.1 GB:DB_XREF GI:134052203 InterPro:IPR001264 InterPro:IPR001460 InterPro:IPR011816 LENGTH 828 SQ:AASEQ MAKRKSRRLRPGRLILLITILIVTIGGLASLGFFAYAMSDMPAFNPQALENMVPTSIYDKDGNLVTRIGTENREPIQLSEVPATVKDAVLATEDEHFYDHHGINFRSLGRAVFRNVAAGEIREGFSTITMQLVKLSYLSPERSMKRKMQEVILTLQMERHFMKDEIFEMYLNKIYFGQGAYGIQSAAQIYFGKDLKTDELTLEEAAFLAGIPQAPSAYSRYLDSGKSLDDGENSEQDKKKLEEQHQKDYDLTLNRRNIVLLRMKEAGKITEEERQAAASKPLPDGTKMQATRYPYPYFIDYVTEKLVQKYGPDMVYKGGLKVYTTLDPKIQKTVELAMANAKNFPNYKPDKNGLPQPQGAAVFMEPGTGYLRAIVGGREHTHQRALNRATQYQILSNGSKIGRQPGSSIKPIVAYGPAVEYKGMGPASVIDDIPTSFGNYSPKNSGGGFRGLITMRQALTSSVNIVAVKLLNSVGISQAVKFAQGLGITTLDANRDGLAMALGGVSSGVVPLDMVGAYGAFANQGIYVKPHAIIRVERFDGSIVEEFKPERRQAMKATTAYLITDMLRSAVQSGTGSRANLGARPVAGKTGTTDEGKDIWFVGYTPELVGAVWIGHDLPTRMPQAYGGIYPAMIWREVMSKSLADVPVRPFTKPSGIVYATVDSKSGLLPGPNTPSDHMVHDMFAQGTIPTKVDDLHQIMEVCATTGELPNDYCTDRITKVVIKTPYTVPPNVADFALRAPVKTCSLHTENGIDPAVAEKYKLTIPDSPENQEMNNGNQEGTNTVTPKPNEGDNWLPGTTGSNTNESEAKKKFRKAAKVKETYQRIIE GT:EXON 1|1-828:0| BL:SWS:NREP 1 BL:SWS:REP 35->693|PBPA_BACSU|e-103|41.5|610/914| TM:NTM 1 TM:REGION 13->35| SEG 7->28|rrlrpgrlillitilivtiggl| SEG 771->784|nqemnngnqegtnt| SEG 809->820|akkkfrkaakvk| BL:PDB:NREP 1 BL:PDB:REP 53->673|3dwkB|1e-75|36.6|568/621| RP:PDB:NREP 1 RP:PDB:REP 51->677|3dwkB|e-105|31.7|580/621| RP:PFM:NREP 2 RP:PFM:REP 63->263|PF00912|4e-43|51.7|174/178|Transgly| RP:PFM:REP 360->638|PF00905|4e-34|41.6|262/289|Transpeptidase| HM:PFM:NREP 2 HM:PFM:REP 62->224|PF00912|3e-62|46.6|161/178|Transgly| HM:PFM:REP 359->639|PF00905|1.2e-37|30.6|271/304|Transpeptidase| GO:PFM:NREP 5 GO:PFM GO:0003824|"GO:catalytic activity"|PF00912|IPR001264| GO:PFM GO:0009252|"GO:peptidoglycan biosynthetic process"|PF00912|IPR001264| GO:PFM GO:0009274|"GO:peptidoglycan-based cell wall"|PF00912|IPR001264| GO:PFM GO:0008658|"GO:penicillin binding"|PF00905|IPR001460| GO:PFM GO:0009273|"GO:peptidoglycan-based cell wall biogenesis"|PF00905|IPR001460| RP:SCP:NREP 2 RP:SCP:REP 49->293|2oluA1|5e-63|41.3|201/208|d.2.1.10| RP:SCP:REP 267->671|2bg1A1|4e-68|24.5|384/452|e.3.1.1| HM:SCP:REP 245->725|2bg1A1|8e-121|41.2|432/0|e.3.1.1|1/1|beta-lactamase/transpeptidase-like| OP:NHOMO 2707 OP:NHOMOORG 838 OP:PATTERN -------------------------------------------------------------------- 343-323233322222233-34223533333345554344455433313335242212225533424887431223331242411111444314112--23444236525---------------3443424444222233---226333334223312222243234684111-21111-11232111134347777776667666665644446783535533222222453333333333333333333332223422323222233322222333333333333333333333333333333333333343333333332333233322323333233122242321432314445333622444312155-766422222555555545554544444444445-7787897765415555666666673534424444443451111111111113335------------2222122211112----1334534444478878756665774566663686467771222243444463452333222332222222222222454542133222222135335443355455454122131111121211111111111133443233322233444333233332422322--11213-1-11144323434444444444-4444444444444344444444334444444444444444443443332342143444544444411131111144343542433333313332322423343333333433334335444443444---------122242222233222444444433344441-136666661111111121--------------------------1-111221121-3 -------------1-----------------------------------------------------------------------------------------------------------------------------------------------------1--------------11-----1--4--1--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 643 STR:RPRED 77.7 SQ:SECSTR ################################################ccccccEEEEcTTccEEEEEcccccccccGGGccHHHHHHHHHHHccccTTcccccHHHHHHTTTTcTTccccccccccHHHHHHHHTcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccTTcccHHHHHHHHTccccGTTTccHHHHHHHHHTTccHHHHcTTTcHHHHHHHHHHHHHHHHHTTcccHTcHHHHHHHHHHHHHHHHHTTcccHHHHHHHTTcccGGGcccccccGGGHHHHHHHHHHHGccccHHHHTTcccEEEEcccHHHHHHHHHHHHHccccccccccccEETTEEEEEEEEETTTccEEEEEccTcTccTTTcccTTTccHHTHHHHHHEEcGGGGHHHHTHHHHHHHccccTTcEEEcccccccccccccTTcccccEEEHHHHHHTTcHHHHHHHHHHHHHHccTTHHHHHHTTccccccccHHHHTTcTTcEEcHHHHHHHHHHHTTTcEEEccccEEEEEccccccEEEccccEEEcccHHHHHHHHHHHHTTccTTcTTTTcccccccEEEEEEEEccEEEEEEEEcccEEEEEEEEEccccGGEHHHHHTHHHHHHHHHHHHHccccccccccccTTEEEETTEEEETTcccccccccccEEccEEEEEEEE######################################################################################################################################### DISOP:02AL 1-8,282-289,669-674,676-676,766-785,801-816| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHcccccEEEEEccccEEEEEEcccEEEEcHHHccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHccEEEccccEEcHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccEEEEEEEcccccccccccccccccccHHHHccccccHHHHHHHHHHHHHHHcccccHHHEEEcccEEEccEEEEEccccccccccHHHHHHHccHHHHHHHHHHccHHHHHHHHHHHcccccccccccccHHcccccccccHHHHHHHHHHHHcccEEEccEEEEEEEcccccEEEcccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccccEEEEEEccccEEEEEEEcccccccccccccHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccHHHHHHHHccccccEEccccEEEEEccccccccccccccccEEEEEccccccccccccHHHHHHHHHHHHccccccccccccccEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHc //