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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50182.1
DDBJ      :             hydrogenases, Fe-only
Swiss-Prot:             

Homologs  Archaea  22/68 : Bacteria  670/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.47.1c.96.1d.15.4d.58.1
:659 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->565 1fehA PDBj e-111 39.5 %
:RPS:PDB   4->202 2bs2B PDBj 2e-18 14.4 %
:RPS:PDB   250->389 1aduB PDBj 1e-31 16.1 %
:RPS:PDB   586->642 2auvA PDBj 2e-04 24.6 %
:RPS:SCOP  4->124 1c4aA2  d.15.4.2 * 2e-19 30.6 %
:RPS:SCOP  139->208 1c4aA3  d.58.1.5 * 8e-13 35.7 %
:RPS:SCOP  211->565 1c4aA1  c.96.1.1 * e-114 42.8 %
:RPS:SCOP  574->636 2fug21  c.47.1.21 * 3e-06 23.8 %
:HMM:SCOP  3->126 1fehA2 d.15.4.2 * 2e-35 36.3 %
:HMM:SCOP  75->208 2fug34 d.58.1.5 * 5.1e-42 43.1 %
:HMM:SCOP  188->567 1fehA1 c.96.1.1 * 1.2e-132 46.4 %
:HMM:SCOP  586->648 2fug21 c.47.1.21 * 1.7e-06 36.5 %
:RPS:PFM   83->123 PF10588 * NADH-G_4Fe-4S_3 1e-09 53.7 %
:RPS:PFM   223->508 PF02906 * Fe_hyd_lg_C 2e-76 50.7 %
:RPS:PFM   514->568 PF02256 * Fe_hyd_SSU 2e-09 38.2 %
:RPS:PFM   586->647 PF01257 * Complex1_24kDa 1e-04 40.3 %
:HMM:PFM   211->508 PF02906 * Fe_hyd_lg_C 2.5e-115 53.4 292/294  
:HMM:PFM   83->123 PF10588 * NADH-G_4Fe-4S_3 9.2e-21 51.2 41/41  
:HMM:PFM   511->568 PF02256 * Fe_hyd_SSU 8.7e-20 32.8 58/60  
:HMM:PFM   139->156 PF00037 * Fer4 1.4e-07 61.1 18/24  
:HMM:PFM   185->205 PF00037 * Fer4 9.7e-10 52.4 21/24  
:BLT:SWISS 5->565 PHF1_CLOPA e-110 39.5 %
:BLT:SWISS 586->647 Y1420_THEMA 3e-06 37.1 %
:PROS 189->200|PS00198|4FE4S_FER_1
:PROS 32->49|PS00641|COMPLEX1_75K_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50182.1 GT:GENE ABO50182.1 GT:PRODUCT hydrogenases, Fe-only GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(1810542..1812521) GB:FROM 1810542 GB:TO 1812521 GB:DIRECTION - GB:PRODUCT hydrogenases, Fe-only GB:NOTE TIGRFAM: hydrogenases, Fe-only PFAM: ferredoxin; 4Fe-4S ferredoxin, iron-sulfur binding domain protein; iron hydrogenase, small subunit; hydrogenase large subunit domain protein KEGG: tte:TTE0894 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) GB:PROTEIN_ID ABO50182.1 GB:DB_XREF GI:134052211 InterPro:IPR000283 InterPro:IPR001041 InterPro:IPR001450 InterPro:IPR003149 InterPro:IPR004108 InterPro:IPR013352 LENGTH 659 SQ:AASEQ MSGKITINGQIIDFTDEKNILAVARKVGIDIPTLCYHPELTIAGACRLCVVEIERMGVQASCSTAPTDGMVVYTNSEKVNRVRKMVLELLLANHDRECTTCDSSGACKLQKYANDYGIKRLRYPNRTTMAPLDTSSLSIVRDPNKCILCGLCVRVCKEKQGIGVWDFKNRGSRTDIVAAMDQPLSESACINCGQCIAVCPTGALTSNSSSIQEIWAAIRDPKKTVVCQIAPAPRAALGEEFGLGSVDVTKKVVTALRKIGFDKVFDTVFTADMTTIEESNEFLSRLVKGENLPLFTSCCPGWVKYAEEFHPELLSNLSSCRSPQQMFGAVLKKKYAKELGIAPQDMFVVSVMPCTAKKYEAKRPEFTTEGAYDVDAVLTTVEAARMIKEAGIIFNTLEESEFDQPMQQATGSGVLFGTTGGVMESVIRYVAGKLLNAEGRVDVEFTRGMEDTKIASINVGDNKLNLAVVNGLSATEALIQKIQSGELDVQAVEVMACPGGCVGGGGQPFQNDNEHRKARASEIYGIDAKLELHKAQDNEDLNKIFEKYWGGCCNHDTHHDLHTHYNPKRRVAGNEIVIKDGNGPEITVCIGEGCMKKGSISLIEKLVNLPVKVKGVFCLENCGNGVSVKVNDEILHVTPENALESIQKKCGCSCGCCSK GT:EXON 1|1-659:0| BL:SWS:NREP 2 BL:SWS:REP 5->565|PHF1_CLOPA|e-110|39.5|559/574| BL:SWS:REP 586->647|Y1420_THEMA|3e-06|37.1|62/75| PROS 189->200|PS00198|4FE4S_FER_1|PDOC00176| PROS 32->49|PS00641|COMPLEX1_75K_1|PDOC00554| SEG 499->506|ggcvgggg| SEG 648->658|kkcgcscgccs| BL:PDB:NREP 1 BL:PDB:REP 5->565|1fehA|e-111|39.5|559/574| RP:PDB:NREP 3 RP:PDB:REP 4->202|2bs2B|2e-18|14.4|187/239| RP:PDB:REP 250->389|1aduB|1e-31|16.1|118/286| RP:PDB:REP 586->642|2auvA|2e-04|24.6|57/85| RP:PFM:NREP 4 RP:PFM:REP 83->123|PF10588|1e-09|53.7|41/41|NADH-G_4Fe-4S_3| RP:PFM:REP 223->508|PF02906|2e-76|50.7|284/295|Fe_hyd_lg_C| RP:PFM:REP 514->568|PF02256|2e-09|38.2|55/59|Fe_hyd_SSU| RP:PFM:REP 586->647|PF01257|1e-04|40.3|62/142|Complex1_24kDa| HM:PFM:NREP 5 HM:PFM:REP 211->508|PF02906|2.5e-115|53.4|292/294|Fe_hyd_lg_C| HM:PFM:REP 83->123|PF10588|9.2e-21|51.2|41/41|NADH-G_4Fe-4S_3| HM:PFM:REP 511->568|PF02256|8.7e-20|32.8|58/60|Fe_hyd_SSU| HM:PFM:REP 139->156|PF00037|1.4e-07|61.1|18/24|Fer4| HM:PFM:REP 185->205|PF00037|9.7e-10|52.4|21/24|Fer4| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01257|IPR002023| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF01257|IPR002023| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01257|IPR002023| RP:SCP:NREP 4 RP:SCP:REP 4->124|1c4aA2|2e-19|30.6|121/126|d.15.4.2| RP:SCP:REP 139->208|1c4aA3|8e-13|35.7|70/83|d.58.1.5| RP:SCP:REP 211->565|1c4aA1|e-114|42.8|355/365|c.96.1.1| RP:SCP:REP 574->636|2fug21|3e-06|23.8|63/178|c.47.1.21| HM:SCP:REP 3->126|1fehA2|2e-35|36.3|124/0|d.15.4.2|1/1|2Fe-2S ferredoxin-like| HM:SCP:REP 75->208|2fug34|5.1e-42|43.1|130/0|d.58.1.5|1/1|4Fe-4S ferredoxins| HM:SCP:REP 188->567|1fehA1|1.2e-132|46.4|358/365|c.96.1.1|2/2|Fe-only hydrogenase| HM:SCP:REP 586->648|2fug21|1.7e-06|36.5|63/0|c.47.1.21|1/1|Thioredoxin-like| OP:NHOMO 1702 OP:NHOMOORG 877 OP:PATTERN ------1111111111--------1---11----1---------1--11---------1-1111---- 21221---------11111-11--12111111211111111111-1--1-----1-----11111122211-------1113-111121121-3-----1-11--21111--------------11-1112--11122222323111111111--11------11--11--------------221114442-22222222212222221-22-22211111---111111--1111111111111111--111---------------------------------------------------------------------265275555555556454443446262332256668869872633332--32-111111111233231134333411111111111-33233433221122223332223322112222333322311111111322-23121111111111111111111111111111121221-2221222222222222222222222222333431233133122212332332122213111111111333215414-1426222--464465475111111681111111111111111111122-2211112---2---1-1111-13221--311-131--221111111112111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111111111111114-121---1-1---------11111111111-1111221122222-11111111111111111-----1--11111212211111111112111111--------2---------------------------3232223222221 ----112-21112222222222222222222222221222222222-2222222122222222221111211222-11-112222211-12222222222222233-2-24294545213223335161DV6-6562-31633331323232182333324722223722124212352P222424224232122111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 624 STR:RPRED 94.7 SQ:SECSTR ###ccEEEEEEEEccTTccHHHHHHHHHHHTcTTcccccccccccccTTEEEETTEEEGGGccGGGcTTcEEEEEccTcTTcTcEEEETTEEEcHHHHHHHHHHTTccccccccccTTcccccccHHHHHHHHcccccEEEHHHTcccccHHHHTcHHHHHHHHTcTTccccHHHHHHHHccTTTGGGcccccHHHHHcTTccEEEcTTccHHHHHHHHHHHEEcccccccccEEEcGGGGTccccccHHHHHHHHHHHHHHTTccHHHHHHccccTTccHHHHHHHHTccccEETTTHHHHHHHHHHHTTTcccccccHHHHHHHHHHHHHHHHHHHHTcccGTTcccccEEEEccGGGccTTcccTTcccccTTccccccccEEcGGTTccGGGcccccccTTcccccGGGcccccTTTHHHHHHHHHTTTTcccTTccccGGGcccccEEEEEEEETTEEEEEEEEEccHHHHHHHHHHHTTcccccccEEEcccccHHHHcccccccHHcHHHHHHHHHHHHHHHcccccGGGcHHHHHHHHHTTccTTcHHHHHHccccccccTH###############EEccccHHHHTTTHHHHHHHHccccccccccccccccTTccccEEGGGcccccccHH################# DISOP:02AL 1-1,505-520,569-581| PSIPRED cEEEEEEccEEEEEccccHHHHHHHHcccccccccccccccccccccEEEEEEccccccEEEccccccccEEEEccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHccccccccccccccccccccccEEEcHHHccccccccEEcccccccEEEEEcccccccEEEccccccccHHHccccccEEEcccccHHccccHHHHHHHHHHcccccEEEEcccccHHHHHcccccccHHHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHHHHHHHccccccEEEcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccHHHEEEEEEEcccHHHHHHccHHHHccccccccEEEcHHHHHHHHHHccccHHHccHHHcccccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEccccccEEEEEEEcccEEEEEEEEEcHHHHHHHHHHHHcccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccHHHHHHEEEEEEEEEcccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHcEEEEEEEEEEcccccccEEEEccEEEEEcHHHHHHHHHHHHccccccccc //