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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50210.1
DDBJ      :             carbamoyl-phosphate synthase small subunit
Swiss-Prot:             

Homologs  Archaea  60/68 : Bacteria  833/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.23.16c.8.3
:359 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->356 1jdbF PDBj 2e-92 48.9 %
:RPS:PDB   1->356 1a9xB PDBj e-102 46.3 %
:RPS:SCOP  3->148 1a9xB1  c.8.3.1 * 1e-61 47.9 %
:RPS:SCOP  150->356 1a9xB2  c.23.16.1 * 1e-72 48.3 %
:HMM:SCOP  1->150 1a9xB1 c.8.3.1 * 4e-59 56.0 %
:HMM:SCOP  149->360 1a9xB2 c.23.16.1 * 6.4e-67 40.3 %
:RPS:PFM   2->130 PF00988 * CPSase_sm_chain 8e-47 62.8 %
:RPS:PFM   184->349 PF00117 * GATase 2e-25 39.0 %
:HMM:PFM   1->131 PF00988 * CPSase_sm_chain 8.4e-63 61.8 131/131  
:HMM:PFM   175->351 PF00117 * GATase 2.8e-51 35.0 177/192  
:BLT:SWISS 1->356 CARA_BACCL e-124 59.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50210.1 GT:GENE ABO50210.1 GT:PRODUCT carbamoyl-phosphate synthase small subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1837103..1838182 GB:FROM 1837103 GB:TO 1838182 GB:DIRECTION + GB:PRODUCT carbamoyl-phosphate synthase small subunit GB:NOTE TIGRFAM: carbamoyl-phosphate synthase, small subunit PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase, small chain KEGG: mta:Moth_0881 carbamoyl-phosphate synthase, small subunit GB:PROTEIN_ID ABO50210.1 GB:DB_XREF GI:134052239 InterPro:IPR000991 InterPro:IPR001317 InterPro:IPR002474 InterPro:IPR006220 InterPro:IPR006274 InterPro:IPR011702 InterPro:IPR012998 LENGTH 359 SQ:AASEQ MEAYLVLEDGTVFTGKGFGATGEQWGEVVFNTGMTGYQEVLTDPSYCGQIVVMTYPLIGNYGINKDDFEAKSSFVRGFVVKEECDRPSNWRVSNKIQEFLAREGVLGIAGIDTRALTRRIRNHGTMRGIISTQAMDPQELVARAKNCPQISGQELVPTVATKEIYTVPGDGHRVLLIDFGAKANIVRCLNNRKCEVIVVPPTTTAKDILALNPEGIMLSNGPGDPTDVPYAVEIVRDLIGKVPIFGICLGHQILGLAVGAKTYKLKFGHRGANHPVKDLESGRVYITSQNHGYAVAKDSLPTDMEVTHINLNDNTVEGMRHLNLPVFSVQYHPEAAPGPMDSEYLFENFLDNMKKYTAV GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 1->356|CARA_BACCL|e-124|59.9|352/364| BL:PDB:NREP 1 BL:PDB:REP 3->356|1jdbF|2e-92|48.9|354/380| RP:PDB:NREP 1 RP:PDB:REP 1->356|1a9xB|e-102|46.3|356/378| RP:PFM:NREP 2 RP:PFM:REP 2->130|PF00988|8e-47|62.8|129/131|CPSase_sm_chain| RP:PFM:REP 184->349|PF00117|2e-25|39.0|164/185|GATase| HM:PFM:NREP 2 HM:PFM:REP 1->131|PF00988|8.4e-63|61.8|131/131|CPSase_sm_chain| HM:PFM:REP 175->351|PF00117|2.8e-51|35.0|177/192|GATase| GO:PFM:NREP 3 GO:PFM GO:0004086|"GO:carbamoyl-phosphate synthase activity"|PF00988|IPR002474| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00988|IPR002474| GO:PFM GO:0003824|"GO:catalytic activity"|PF00117|IPR000991| RP:SCP:NREP 2 RP:SCP:REP 3->148|1a9xB1|1e-61|47.9|146/151|c.8.3.1| RP:SCP:REP 150->356|1a9xB2|1e-72|48.3|207/228|c.23.16.1| HM:SCP:REP 1->150|1a9xB1|4e-59|56.0|150/151|c.8.3.1|1/1|Carbamoyl phosphate synthetase, small subunit N-terminal domain| HM:SCP:REP 149->360|1a9xB2|6.4e-67|40.3|211/0|c.23.16.1|1/1|Class I glutamine amidotransferase-like| OP:NHOMO 2340 OP:NHOMOORG 1084 OP:PATTERN 11-1-12222222222-222222131121233233333222222222213222312--1-1111--22 2222311111123322223-22222222222222222212232212212331322223112211222232233333331-1122222222222222-2121221122121--------------122222222222222222222222422222222222222222234322222222222222322231123333333333233333333333333333334433333333222222222222222232213121411432224422111222312233332222222222222222222222222222222211222111135-23---111-1-1334422222-3-12223233322111323223-21223222211111333222211122122222222222-33333333122122222222222222232222222222222222222222122221111111111---------------11112221132222222222232222222222222222222222222222222222223222222222222222222222214342212122112122222222222223231222212222211211111112222222222222222222111121222222212222211222211111122222222222222222-2222222222222222222222223232222222222222222222222222122222222222222222212233332223321112211111111122222223332222222223222222222222222222222222222222212222222222233222221332222--------------------------------------2-121222223 11--115-311-1231224233324333323334343333343333333333333333233333233323333332323333333333-32223332223222454-24143322322122222432216H2-3221122212211221222122322226-13211211611412222V2222243753732354342 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 359 STR:RPRED 100.0 SQ:SECSTR cEEEEEETTccEEEEEEccccEEEEEEEEEEcccccHHHHHTcGGGcTEEEEEccccccTTcccGGGcccccccccEEEccccccccccTTccccHHHHHHHTTcEEEEcccHHHHHHHHHHHccEEEEEEcccccHHHHHHHHHHccccTTcccHHHHcccccEEGGGccEEEEEEEccccHHHHHHHHHTTEEEEEEETTccHHHHHTTcccEEEEcccccccTTcHHHHHHHHHHTTccccEEEEHHHHHHHHHTTccEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEccTTccTTEEEEEEETTTccEEEEEEccccEEEEcccTTccccccTTTHHHHHHHHHHHHHEEH PSIPRED ccEEEEEccccEEEEEEEccccEEEEEEEEEccccccccccccHHcccEEEEEcccccccccccHHHHcccccEEEEEEEccccccccccHHHccHHHHHHHccccccccccHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHcccccccccccEEcccccEEccccccEEEEEEccccHHHHHHHHHcccEEEEEEccccHHHHHcccccEEEEccccccHHHcHHHHHHHHHHHccccEEEEcHHHHHHHHHHccEEEEccccccccccEEEEccccEEEEEEEEEEEEEEEcccccccEEEEEEcccccEEEEEEccccEEEEEcccccccccHHHHHHHHHHHHHHHHcccc //