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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50294.1
DDBJ      :             cobalamin B12-binding domain protein
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  265/915 : Eukaryota  64/199 : Viruses  0/175   --->[See Alignment]
c.23.6
:134 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->119 5reqA PDBj 7e-22 44.8 %
:RPS:PDB   4->126 3bicB PDBj 4e-20 39.0 %
:RPS:SCOP  4->83 1bmtA2  c.23.6.1 * 2e-06 22.5 %
:HMM:SCOP  4->136 7reqA2 c.23.6.1 * 1.6e-49 50.4 %
:RPS:PFM   16->81 PF02310 * B12-binding 7e-11 48.5 %
:HMM:PFM   6->101 PF02310 * B12-binding 1.3e-23 32.6 95/121  
:HMM:PFM   83->124 PF01081 * Aldolase 0.00048 29.3 41/196  
:BLT:SWISS 4->116 MUTB_PORGI 2e-22 46.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50294.1 GT:GENE ABO50294.1 GT:PRODUCT cobalamin B12-binding domain protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 1936118..1936522 GB:FROM 1936118 GB:TO 1936522 GB:DIRECTION + GB:PRODUCT cobalamin B12-binding domain protein GB:NOTE PFAM: cobalamin B12-binding domain protein KEGG: gsu:GSU1578 B12-binding protein GB:PROTEIN_ID ABO50294.1 GB:DB_XREF GI:134052323 InterPro:IPR006158 InterPro:IPR006159 LENGTH 134 SQ:AASEQ MSVRRIRILLAKPGLDGHDRGAKVLARCFRDAGFEVIYTGCHQTPEQIAAAALQEDVDVVGLSCLSGAHKYLFPQVAKLLKDEGADDIVVIGGGIIPEQDMDALYEAGLKAIFTPGATLESLVEWINTNVTPRA GT:EXON 1|1-134:0| BL:SWS:NREP 1 BL:SWS:REP 4->116|MUTB_PORGI|2e-22|46.0|113/715| SEG 84->96|gaddivvigggii| BL:PDB:NREP 1 BL:PDB:REP 4->119|5reqA|7e-22|44.8|116/725| RP:PDB:NREP 1 RP:PDB:REP 4->126|3bicB|4e-20|39.0|123/715| RP:PFM:NREP 1 RP:PFM:REP 16->81|PF02310|7e-11|48.5|66/117|B12-binding| HM:PFM:NREP 2 HM:PFM:REP 6->101|PF02310|1.3e-23|32.6|95/121|B12-binding| HM:PFM:REP 83->124|PF01081|0.00048|29.3|41/196|Aldolase| GO:PFM:NREP 2 GO:PFM GO:0031419|"GO:cobalamin binding"|PF02310|IPR006158| GO:PFM GO:0046872|"GO:metal ion binding"|PF02310|IPR006158| RP:SCP:NREP 1 RP:SCP:REP 4->83|1bmtA2|2e-06|22.5|80/156|c.23.6.1| HM:SCP:REP 4->136|7reqA2|1.6e-49|50.4|133/168|c.23.6.1|1/1|Cobalamin (vitamin B12)-binding domain| OP:NHOMO 474 OP:NHOMOORG 361 OP:PATTERN 11----1111111111-------111111-11----------------------1111111111--11 11222-1-111---12211-121122111112222211111223---1------------21511113331-----------1-----11111111---1-11111-111---------------1111111111122222---11-------------------------------------22211----1-----------------2-------1111---------1--------------------------------------------------------------------------------------------11-------------------------2--1-11121--1--112-1--1--2221-----1111111-111121111111-111-22222222112-111111111221243212222233222-------------212------------------------------1111------------1------12-------11--1-11---12111111111--2----------------211-211-----------2121213-2111112-1-----------------------------------------------------------------------------111-1---11-11-11--11-1-111111----------1------------------1111--1-----------------------------------------------------------------------------------------------------------------1-222222------------------------------------11111-1----11 ----111-21----1--------------------------------------------------------------------------------------------1312111111111111112-1-161-121----2-11211--11-11111132311211-----111------------------1111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 130 STR:RPRED 97.0 SQ:SECSTR HHccccEEEEEEcccccccHHHHHHHHHHHHTTcEEEEccTTccHHHHHHHHHHHTccEEEEEEcccGGGTHHHHHHHHHHHTTcTTcEEEEEEcccGGGHHHHHHHTccEEEcTTccHHHHHHHHcccG#### DISOP:02AL 1-3,132-135| PSIPRED ccccccEEEEEEEcccHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHHHHcccEEEEEHHHcccHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHccccEEccccccHHHHHHHHHHHHHccc //