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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50361.1
DDBJ      :             ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  114/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.52.1c.94.1
:340 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   148->255 2g29A PDBj 3e-05 23.4 %
:RPS:PDB   38->316 1blfA PDBj 1e-25 10.0 %
:RPS:SCOP  48->209 1us4A  c.94.1.1 * 9e-14 18.0 %
:RPS:SCOP  194->300 1sdoA  c.52.1.21 * 7e-17 12.5 %
:HMM:SCOP  36->264 1xs5A_ c.94.1.1 * 1e-38 26.9 %
:RPS:PFM   63->257 PF09084 * NMT1 4e-17 36.0 %
:HMM:PFM   50->259 PF09084 * NMT1 8.3e-27 28.3 205/216  
:BLT:SWISS 30->339 YTLA_BACSU 4e-85 51.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50361.1 GT:GENE ABO50361.1 GT:PRODUCT ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2015648..2016670) GB:FROM 2015648 GB:TO 2016670 GB:DIRECTION - GB:PRODUCT ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic component GB:NOTE KEGG: tte:TTE0643 ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic components GB:PROTEIN_ID ABO50361.1 GB:DB_XREF GI:134052390 LENGTH 340 SQ:AASEQ MQKFKSILVVIALMSLVLAVFSGCTNDTGKTSGELTKVRLCEVVHSIFYAPQYVAINEGFFKEEGLDIELTTGQGADKVMTALLSNAADIGLAGPEATVYVYNQKKQDYVINFAQLTKKDGSFLVGRNQEPEFEWENLKGKTIIGGRPGGVPEMVLEYVLKKHGLTPGKDVNIITNLQFTATAGAFKGGTGDYVALFEPTASLMEKEKAGYVVASLGQSSGEIPYTVYMAQNSFMEKNPEVIQKFTNALYKAQLWVANHSPQEIASSIQPFFPDTDLDLLAAVIERYKSQDTWNTNPVMDNQAFNYLQEIIQVAGELDKPVEPNVLITHEYAEKTVISKK GT:EXON 1|1-340:0| BL:SWS:NREP 1 BL:SWS:REP 30->339|YTLA_BACSU|4e-85|51.6|310/334| TM:NTM 1 TM:REGION 5->27| SEG 179->191|ftatagafkggtg| BL:PDB:NREP 1 BL:PDB:REP 148->255|2g29A|3e-05|23.4|107/385| RP:PDB:NREP 1 RP:PDB:REP 38->316|1blfA|1e-25|10.0|269/685| RP:PFM:NREP 1 RP:PFM:REP 63->257|PF09084|4e-17|36.0|189/200|NMT1| HM:PFM:NREP 1 HM:PFM:REP 50->259|PF09084|8.3e-27|28.3|205/216|NMT1| RP:SCP:NREP 2 RP:SCP:REP 48->209|1us4A|9e-14|18.0|161/298|c.94.1.1| RP:SCP:REP 194->300|1sdoA|7e-17|12.5|104/192|c.52.1.21| HM:SCP:REP 36->264|1xs5A_|1e-38|26.9|219/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 135 OP:NHOMOORG 118 OP:PATTERN ---------------------------------------------------1---------------- --1----------------------1-----------------1----------1--------------------------------------------------------------------------------1--------------------------------------------------------111111111111111111-111111111111--------11---------------------------------------------------------------------------------11---111--112311121211111-112---112--11--111121-1--1111------------------121--21-11-----------1------1--11--2111--1-----31----------------------------------------------------------------13111-------------11--------11111--221-------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------1------------------------------------------------------- -----------------1----------------------------1------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 88.2 SQ:SECSTR ##################################TccEEEEEEEccHHHHHHHHHHHHHHGGGccccEEEEEcccHHHHHHHHHTTccccEEEcHHHHHHHHcTTTcEEEEEccccEEcEEEEEEEEEcccccccTTcTTccEEEccTTcTTTHHHHHHHHHHHTccTTTccHHHHHHTTcHHcTTcccEEcTTccTTTcGGGcTTcccccTTcTTcccTTcTTcHHHHHHHHHHTTcccEEEEETTHHHHHHcccHHHHTTEEEccTTcccccTTcTTTcccEEEEccEEEEEcccccHHHHHHHHHHHHHHccTccccccccHHccHHHHHH###### DISOP:02AL 1-2,25-35,340-341| PSIPRED cccHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccccHHHHHHHHHccHHHHcccEEEEEEcccHHHHHHHHHcccEEEEEEccHHHHHHHHccccccEEEEEEccccccEEEEEEcccccccHHHHcccEEEEEccccHHHHHHHHHHHHccccHHHcEEEEEcccHHHHHHHHHcccccEEEEccHHHHHHHHccccEEEEEccccccccccEEEEEcHHHHHHcHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccccccHHHHccHHHHHHHHHHcc //