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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50370.1
DDBJ      :             two component transcriptional regulator, winged helix family
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  855/915 : Eukaryota  13/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:234 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->231 2oqrA PDBj 3e-39 34.4 %
:RPS:PDB   1->230 3c3wB PDBj 1e-30 14.6 %
:RPS:SCOP  4->119 1a0oA  c.23.1.1 * 7e-25 23.3 %
:RPS:SCOP  136->232 1gxpA  a.4.6.1 * 6e-24 33.3 %
:HMM:SCOP  3->199 1s8nA_ c.23.1.1 * 6.8e-41 36.0 %
:RPS:PFM   5->114 PF00072 * Response_reg 2e-19 40.9 %
:RPS:PFM   156->231 PF00486 * Trans_reg_C 8e-14 40.8 %
:HMM:PFM   5->114 PF00072 * Response_reg 1.9e-32 46.4 110/112  
:HMM:PFM   157->232 PF00486 * Trans_reg_C 7e-27 40.8 76/77  
:BLT:SWISS 3->232 YCF27_CYAPA 3e-45 43.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50370.1 GT:GENE ABO50370.1 GT:PRODUCT two component transcriptional regulator, winged helix family GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2024564..2025268) GB:FROM 2024564 GB:TO 2025268 GB:DIRECTION - GB:PRODUCT two component transcriptional regulator, winged helix family GB:NOTE PFAM: response regulator receiver; transcriptional regulator domain protein KEGG: chy:CHY_2047 DNA-binding response regulator GB:PROTEIN_ID ABO50370.1 GB:DB_XREF GI:134052399 InterPro:IPR001789 InterPro:IPR001867 LENGTH 234 SQ:AASEQ MLKKILIVEDDLGIRELLRLYLSKHGYQVVMAQDGIRALEIYELEQPDLILLDILLPGVDGYSVCQELRKYSNVPIIFISCKKDSKDIIEGLELGADDFITKPFDPDVLMARVQASLRRAPIFRRIASSRKIVNRQVIKYGNLEIDMANFEVRLDGNLVTLSAKELQLLIFLVQHPNQIFSTEQLYLKVWGLDSIGDNRTVMVHISNIRKKIESNPSQPERILNIRGIGYKFIG GT:EXON 1|1-234:0| BL:SWS:NREP 1 BL:SWS:REP 3->232|YCF27_CYAPA|3e-45|43.6|227/239| SEG 47->57|pdlilldillp| BL:PDB:NREP 1 BL:PDB:REP 5->231|2oqrA|3e-39|34.4|221/226| RP:PDB:NREP 1 RP:PDB:REP 1->230|3c3wB|1e-30|14.6|206/210| RP:PFM:NREP 2 RP:PFM:REP 5->114|PF00072|2e-19|40.9|110/111|Response_reg| RP:PFM:REP 156->231|PF00486|8e-14|40.8|76/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 5->114|PF00072|1.9e-32|46.4|110/112|Response_reg| HM:PFM:REP 157->232|PF00486|7e-27|40.8|76/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 4->119|1a0oA|7e-25|23.3|116/128|c.23.1.1| RP:SCP:REP 136->232|1gxpA|6e-24|33.3|96/103|a.4.6.1| HM:SCP:REP 3->199|1s8nA_|6.8e-41|36.0|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 10653 OP:NHOMOORG 882 OP:PATTERN -----------------------------1--------111-111-17-8222----1---------- 6LG6L466778655CBBBB-BI44BBBBBBB9IFHHAGDEBEFGAA786877CDF55711KIL6L8GONQ7444455548JC714466BCRH-A22---34I498P6J7J--------------132332236272QPPXTG7DU5jTfXUTDHJBC767988ONEFijvK684565675545ED755351C7HVVWVWTVWIWTXXUSIIECCEVWdABDW9FDA99A9Afa7AA9A99899AAA9979996B675CC655466677CC655675686DED866899988888898888555556666765598766476776VKLbRRRWVVWTTLFfWWADFBRLG8BDHN95cXJCC646647697428FB7GDDA65666FDMKMDACGKEHK9989999988B-FFEEEKGJ9KA1OGGJJHLPQKHIEK9B7E8GB7ABABACCCCCCCCAA99ANCB2222222211332333333223323222234AD468A96DPRUSXOJHHHEMMTTJHJICJVNSILKP12IOMRAHDATFJIL7EMJACACG82322212974ENRBQOA86946JF4471NGLDJJIDCBBECEM7BL7A96666667333433333FK9BI66JG9GIKO9JHCKGMMJDJHMJJJLJJMKNO--34565------DEEEBCBEEEFEFFGEE-EGFEEEEEEGEEEEEEEEDJIJCE989DDDDDDDDCDDCDCDDEDCCDDEE81BEEEFFFEEFFF--2E3333356558BS8P444333244443124CB9AC7C88BJFQORRNYVYKSVVSJONQ3212132127EFFMEEEEEHINIJKLC9E99DDC4434--P16645882111-2133-2-------------------------38443556455G3 --------------2--------------------------------------------------------------------------------------1--------------------------------------------------------3----2-1-------3-115-------3--8---1-8---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 234 STR:RPRED 100.0 SQ:SECSTR cEEHEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHcEEETTEEEETTTHHHHHccTTTTccHHHHHHHHHHTTTccHcccHHHHHHHHHHHHHTccHHHHHHHHHHHHHHTTccccccHHHHHHHHHTcEEET DISOP:02AL 1-1,122-136| PSIPRED cccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccccEEcccccHHHHHHHHHHHHHHcccccccccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHcccccccccEEEEEccccEEEcc //