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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50377.1
DDBJ      :             DNA topoisomerase III
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  891/915 : Eukaryota  183/199 : Viruses  1/175   --->[See Alignment]
e.10.1g.41.3
:695 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->596 1d6mA PDBj 4e-96 33.8 %
:RPS:PDB   2->614 1cy1A PDBj e-130 24.2 %
:RPS:SCOP  1->596 1d6mA  e.10.1.1 * e-158 33.0 %
:RPS:SCOP  609->657 1yuaA1  g.41.3.3 * 2e-04 8.7 %
:HMM:SCOP  2->598 1d6mA_ e.10.1.1 * 1.3e-174 41.1 %
:RPS:PFM   3->118 PF01751 * Toprim 3e-06 38.5 %
:RPS:PFM   153->582 PF01131 * Topoisom_bac 1e-66 41.0 %
:HMM:PFM   153->581 PF01131 * Topoisom_bac 1.4e-124 42.1 392/404  
:HMM:PFM   2->121 PF01751 * Toprim 5.5e-10 35.7 84/96  
:BLT:SWISS 2->630 TOP3_BACCR e-131 43.6 %
:PROS 302->317|PS00396|TOPOISOMERASE_I_PROK
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50377.1 GT:GENE ABO50377.1 GT:PRODUCT DNA topoisomerase III GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2034269..2036356) GB:FROM 2034269 GB:TO 2036356 GB:DIRECTION - GB:PRODUCT DNA topoisomerase III GB:NOTE KEGG: mta:Moth_0349 DNA topoisomerase TIGRFAM: DNA topoisomerase III PFAM: TOPRIM domain protein; DNA topoisomerase, type IA, central domain protein SMART: DNA topoisomerase I, ATP-binding; DNA topoisomerase I, DNA-binding; Toprim sub domain protein GB:PROTEIN_ID ABO50377.1 GB:DB_XREF GI:134052406 InterPro:IPR000380 InterPro:IPR003601 InterPro:IPR003602 InterPro:IPR005738 InterPro:IPR006154 InterPro:IPR006171 InterPro:IPR013497 LENGTH 695 SQ:AASEQ MKQLILAEKPSVGRDIVNAIGGHFEKRDGYYENSQYIISWAIGHLVELCEPEDYQPNLKKWTLSALPIIPECFKLKPNPKTIKQYKVVKQLLNRPDVELIAGTDAGREGELILRYIMRLSGYSRPFKRLWLSETTPESIRKGLANPLPGQAKDLLAAAAECRSHADWLIGINATRAFTKKHGDLFSIGRVQTPTLGLIVAREKEIKTFIPAHYWELYADFVTTDGQVYRGKWFKNKNKNRFNQEADGISIKNKIVGQDGSVIKVEEKAVSEPPPTLFNLNDLQKEANKKFGFTASQTLEIAQALYEKHKLLSYPRTEFKHLTNELAKTIPSRLSALGSVSGYSKFVAYAQSAPKPGKRFIDDAKVGDHHALIPTNVKPTAALSPNEAKIYNMVARRFLAMFFPAAEYKQTKIMTSVSDETFLTSGKIELSPGWKEVIPPLKGENKEKSDEEVLLPPLTKGENVAVTKAKLQQKKTEPPKRYTEGTLLAVMEGAGKFVDDKALKDAMKGHGLGTSATRAAIIERLIKVGYVERKSKTLIPTQKGETLISLVPEVVSSPQMTGEWEKALADIEAGQVNPKRFMSEIISLTKKIVNLAKEQKTNGYMPESTKEVVGKCPLCGREVVEYAKKFGCGGFREGCAFSFGKQILKKKITVKQAKQLLTNGKVLIKGFTSSKTGKKFDAALVLKDGKVSFDFS GT:EXON 1|1-695:0| BL:SWS:NREP 1 BL:SWS:REP 2->630|TOP3_BACCR|e-131|43.6|614/729| PROS 302->317|PS00396|TOPOISOMERASE_I_PROK|PDOC00333| SEG 231->242|kwfknknknrfn| BL:PDB:NREP 1 BL:PDB:REP 3->596|1d6mA|4e-96|33.8|585/603| RP:PDB:NREP 1 RP:PDB:REP 2->614|1cy1A|e-130|24.2|546/557| RP:PFM:NREP 2 RP:PFM:REP 3->118|PF01751|3e-06|38.5|91/110|Toprim| RP:PFM:REP 153->582|PF01131|1e-66|41.0|400/407|Topoisom_bac| HM:PFM:NREP 2 HM:PFM:REP 153->581|PF01131|1.4e-124|42.1|392/404|Topoisom_bac| HM:PFM:REP 2->121|PF01751|5.5e-10|35.7|84/96|Toprim| GO:PFM:NREP 4 GO:PFM GO:0003677|"GO:DNA binding"|PF01131|IPR013497| GO:PFM GO:0003916|"GO:DNA topoisomerase activity"|PF01131|IPR013497| GO:PFM GO:0005694|"GO:chromosome"|PF01131|IPR013497| GO:PFM GO:0006265|"GO:DNA topological change"|PF01131|IPR013497| RP:SCP:NREP 2 RP:SCP:REP 1->596|1d6mA|e-158|33.0|588/603|e.10.1.1| RP:SCP:REP 609->657|1yuaA1|2e-04|8.7|46/65|g.41.3.3| HM:SCP:REP 2->598|1d6mA_|1.3e-174|41.1|591/609|e.10.1.1|1/1|Prokaryotic type I DNA topoisomerase| OP:NHOMO 1825 OP:NHOMOORG 1141 OP:PATTERN 221111121111111111111111111111111112111111111111122221212211111111-- 1121111111111111111-1111111111111111111111111111111111111111111111111111111-221121211221445412341--1131112221211111111111111111111111111111111111132321111111111111111122211111111111111111121112234346343335445432222253413422221222223332222221232222223222311111211111211112311121111141122111111111111111111111121111111111111113333333334334326333433233232232133341211121111112111111111111111111112111111111111111-11212213112111111111111111111111111111111111111111111111111111111111111111111111111111111111116111112211111111111111152121211111132512111112111112111211111121411112111221122221111111111111121211111211311211111111111111332321322124223232222222222222221-111121--11122233242222222222-3222222222222222222223322343222332233332322423222222-222232222422--211111111111112222223233222233221111111112112222233122332243111111111123322222232222112142211142231121111111-----1-111111111-11--111111--111-1112111111111121 1122112-73211111111111111112211112-111-1111111111-1111111-1-11-1111-111111111--111111111-121111111111-1212111152322212121221631319I2-322211222221-211122-42322221C2323-212322321133N3231342251323121112 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 635 STR:RPRED 91.4 SQ:SECSTR ccEEEEEccHHHHHHHHTTccTTcHTcccEEETTTEEEEEcccccEEcccHHHHHHHHHHHHHTEETTTTTEEccEEcTTHHHHHHHHHHHHHTccccEEEcccccHHHHHHHHHHHHHHcccGGEEEcccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccccTTHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcTTccEEEEEEEETTEEcccccHHHHHHHHHHHHHccEEEEEEEEEEEEEcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHTTTcccccccccccccHHHHHHHHHHHHHHTHHcHHTTTcccTcGGcGGGcccccccccccccccccccTTccGGccHHHHHHHHHHHHHHHHHTcccEEEEEEEEEEEETTEEEEEEEEEEEEcGGGGGccHETTHHHTTTccccccccccTTcEEEEEEEEEEEEEccccccccHHHHHHHHHccGGGcccHHHHHHHHHTTcccTTTHHHHHHHHHTcccEEEccccEEEcHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHTccGGGHHTccccccccccccccGGGTcccEEEEEEEEcc############################################################ DISOP:02AL 267-270,355-363,380-380,596-609,668-675| PSIPRED ccEEEEEccHHHHHHHHHHccccccccccccccccEEEEEEEccccccccHHHccHHHcccccccccccccccEEEEcccHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHcccccEEEEEEEcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccccccccHHHHHHHHHHHHHHHHccccccEEEEEEEEEcccccEEEEEEEccccccccccHHHHHHHHHHHccccEEEEEEEEcEEEccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEccEEEEEEEEEEEEccHHHHcccccccccccccccccccccccccEEEEEEEEEEEEEccccccccHHHHHHHHHHcccccccHHHHHHHHHccccccccHHHHHHHHHHcccEEEEccEEEEcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEccEEEEcccccccccccccccccccccHHHHHHHHHcccEEEEEcccccccccEEEEEEEccccEEEEEc //