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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50387.1
DDBJ      :             putative PAS/PAC sensor protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  430/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.110.3d.122.1
:547 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   336->531 3gieB PDBj 1e-09 26.4 %
:RPS:PDB   215->300 3b33A PDBj 2e-08 24.1 %
:RPS:PDB   330->515 3ehjA PDBj 5e-21 18.0 %
:RPS:SCOP  215->300 1d7eA  d.110.3.1 * 1e-06 15.1 %
:RPS:SCOP  410->532 1r62A  d.122.1.3 * 3e-07 12.2 %
:HMM:SCOP  214->319 1otdA_ d.110.3.1 * 6.5e-07 23.1 %
:HMM:SCOP  406->532 1b3qA3 d.122.1.3 * 4.3e-13 23.6 %
:RPS:PFM   337->406 PF07730 * HisKA_3 7e-05 28.4 %
:HMM:PFM   446->531 PF02518 * HATPase_c 1.3e-10 33.7 86/111  
:HMM:PFM   217->302 PF00989 * PAS 5.9e-08 31.0 84/113  
:HMM:PFM   337->404 PF07730 * HisKA_3 1.7e-07 27.7 65/68  
:HMM:PFM   43->165 PF05227 * CHASE3 9.5e-07 18.0 122/138  
:BLT:SWISS 66->170 KLP1_SCHPO 5e-04 25.7 %
:BLT:SWISS 330->516 DEGS_BREBE 5e-24 33.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50387.1 GT:GENE ABO50387.1 GT:PRODUCT putative PAS/PAC sensor protein GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2047634..2049277 GB:FROM 2047634 GB:TO 2049277 GB:DIRECTION + GB:PRODUCT putative PAS/PAC sensor protein GB:NOTE TIGRFAM: PAS sensor protein PFAM: ATP-binding region, ATPase domain protein domain protein KEGG: bha:BH3629 two-component sensor histidine kinase involved in degradative enzyme GB:PROTEIN_ID ABO50387.1 GB:DB_XREF GI:134052416 InterPro:IPR000014 InterPro:IPR003594 LENGTH 547 SQ:AASEQ MTINKKLLNVFVLLLAITFLNSVFLFKKFSDTYGQIDKIQSFQKQLTTFDELFLDIDAMATNLQDYIVLRDHKYLENYYRESSYIVKKQTELYNSPTLSKNQDVLQLMELSKSYMSFASLEVIQVLQTNNFSRANTEYLYTRNKELTNEIINKLNSIKKDNDNQISKYFHNTILNIDNKIILLLFILFSSLLLLPYLLYLMFKPSLTKCVYTSELAEYSNDAVMFIDSIGNVKYVNKSAQDLFGLLPENVVSKNVQQFPKLFPRLQNVIQPLFHSLMHQKESLKNKVTFKNDGRSIDLTVDYISINLFNRFIGVMMVSRCASRQNGKPLLLDTLEKERKRISIEIHDWIARYMSTIIHSLDYNLRLHKNGNLKGDQLMHNLNDLRNHCQNAAIEMRGIMNDIHPYLIDKVGLISALESYINTFEKLNNIKVYIFYHDRALKLKKKDEIIIYRIIQEALSNIVKHARASEVDINFTKEHDTLKIEIMDNGGTEGDFVAGKGLWGMKERANLMGGDIVFGFCETGFCVTLSVPILSGGQNDGENQNNAD GT:EXON 1|1-547:0| BL:SWS:NREP 2 BL:SWS:REP 66->170|KLP1_SCHPO|5e-04|25.7|105/100| BL:SWS:REP 330->516|DEGS_BREBE|5e-24|33.7|181/386| TM:NTM 2 TM:REGION 7->26| TM:REGION 177->199| SEG 4->15|nkkllnvfvlll| SEG 181->200|illlfilfssllllpyllyl| BL:PDB:NREP 1 BL:PDB:REP 336->531|3gieB|1e-09|26.4|182/211| RP:PDB:NREP 2 RP:PDB:REP 215->300|3b33A|2e-08|24.1|83/105| RP:PDB:REP 330->515|3ehjA|5e-21|18.0|172/196| RP:PFM:NREP 1 RP:PFM:REP 337->406|PF07730|7e-05|28.4|67/68|HisKA_3| HM:PFM:NREP 4 HM:PFM:REP 446->531|PF02518|1.3e-10|33.7|86/111|HATPase_c| HM:PFM:REP 217->302|PF00989|5.9e-08|31.0|84/113|PAS| HM:PFM:REP 337->404|PF07730|1.7e-07|27.7|65/68|HisKA_3| HM:PFM:REP 43->165|PF05227|9.5e-07|18.0|122/138|CHASE3| GO:PFM:NREP 4 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF07730|IPR011712| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF07730|IPR011712| GO:PFM GO:0016021|"GO:integral to membrane"|PF07730|IPR011712| GO:PFM GO:0046983|"GO:protein dimerization activity"|PF07730|IPR011712| RP:SCP:NREP 2 RP:SCP:REP 215->300|1d7eA|1e-06|15.1|86/119|d.110.3.1| RP:SCP:REP 410->532|1r62A|3e-07|12.2|123/136|d.122.1.3| HM:SCP:REP 214->319|1otdA_|6.5e-07|23.1|104/0|d.110.3.1|1/1|PYP-like sensor domain (PAS domain)| HM:SCP:REP 406->532|1b3qA3|4.3e-13|23.6|127/185|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 836 OP:NHOMOORG 431 OP:PATTERN -------------------------------------------------------------------- 15411111111111-------1---2------1111--42---1-1------1----1---121-1-3-1----------1-------11---------1-2-21835-1--------------------------56676454611--1-----------------112-------------22211--1136223236543644765456534565122521111111195222222222222222233121---22-1--111-11111----111111122212211111111111-------------21111-1112-21411111121-1-11------2-1--7111-74-21123-11-1----21-----------2--3--111--111-111-1-12-11-12-11-11-22212--22211---1-1------111----------------------------------------------------11--3234312111133693333132261333--543321212224212413534---------111423-241--21-11----11211211322121-26------------------------------11-3111-22222--11221-223122----111------1-11-11-11--------1-----1---1-----------221-1111-1-111-1111-1-----------11111-11111---2---------1-2-1-----1----------------1--2-11112312422212222-------------22222211111--11111112----1-------11--------2-------------------------------------15- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 334 STR:RPRED 61.1 SQ:SECSTR ####################################################################################################################################################################################################################cHHHHHHccEEEEEcTTccEEEcTTHHHHHHHHHTcccccccHHHHccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTcccHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHccHHHHHHHHHHTTcEEcccccccccccHHHHHHHHHHHHHHHHHHHHTcccEEEEEEEEcccEEEEEEEEcccccccTTcccHHHHHHHHHHHTTcEEEEccccEEEEEEEEEEccTTTcccccccccH# DISOP:02AL 1-3,533-548| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHEEEEcHHHHHHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEccccEEEEccHHHHHHHcccHHHHccccHHHHccccHHHHHHHHHHHHHHHccccEEEEEEEEccccEEEEEEEEEEEEccccEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHccEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEccEEEEEEEEccccccccccccHHHHHHHHHHHcccEEEEEEccccEEEEEEEEcccccccccccccccc //