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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50396.1
DDBJ      :             fumarase alpha subunit
Swiss-Prot:             

Homologs  Archaea  38/68 : Bacteria  477/915 : Eukaryota  25/199 : Viruses  0/175   --->[See Alignment]
d.131.1
:283 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   66->148 1axcC PDBj 2e-08 24.1 %
:RPS:SCOP  66->148 1ge8A2  d.131.1.2 * 1e-15 15.7 %
:RPS:PFM   16->283 PF05681 * Fumerase 3e-60 47.4 %
:HMM:PFM   12->283 PF05681 * Fumerase 9.5e-116 59.4 271/271  
:BLT:SWISS 16->277 FUMA_METJA 2e-41 42.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50396.1 GT:GENE ABO50396.1 GT:PRODUCT fumarase alpha subunit GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2057857..2058708) GB:FROM 2057857 GB:TO 2058708 GB:DIRECTION - GB:PRODUCT fumarase alpha subunit GB:NOTE TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha subunit PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region KEGG: mta:Moth_2283 hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region GB:PROTEIN_ID ABO50396.1 GB:DB_XREF GI:134052425 InterPro:IPR004646 LENGTH 283 SQ:AASEQ MLIIRTIDCEVIISEVARLCQEANFKLEDDVVQSFKCSYETEVSQSGKEILNLLIENAAIAANESIPMCQDTGVAVVFLELGQDTHIINGNLYKAINEGVRKGYQEGYLRKSMVAHPLERVNTGDNTPAVIHTRIVPGDQVKITVAPKGGGSENMSALKMLKPAEGVEGVKNFILETVENAGPNPCPPLIVGVGIGGTMEKCALLAKEALLRSVGEPHPMPDIAELEQELLGKINNLGIGPSGLGGRTTALAVHIEIFGSHIASLPVAVNLNCHAARHKSVVI GT:EXON 1|1-283:0| BL:SWS:NREP 1 BL:SWS:REP 16->277|FUMA_METJA|2e-41|42.4|262/285| SEG 49->64|eilnllienaaiaane| SEG 200->211|ekcallakeall| RP:PDB:NREP 1 RP:PDB:REP 66->148|1axcC|2e-08|24.1|83/248| RP:PFM:NREP 1 RP:PFM:REP 16->283|PF05681|3e-60|47.4|266/271|Fumerase| HM:PFM:NREP 1 HM:PFM:REP 12->283|PF05681|9.5e-116|59.4|271/271|Fumerase| GO:PFM:NREP 1 GO:PFM GO:0016829|"GO:lyase activity"|PF05681|IPR004646| RP:SCP:NREP 1 RP:SCP:REP 66->148|1ge8A2|1e-15|15.7|83/122|d.131.1.2| OP:NHOMO 715 OP:NHOMOORG 540 OP:PATTERN ---1-11----------1111111--------211111111111111111111111111-----1--- -11-11-------------------1----------1121--------------------111-111111----------1211-11111111111-----1----1------------------11111-111-------111--------------------------------------------11111-111111111111111-1----1111111---------1--------------------------------11---------------------------------------------------------11-11111111111111111---111--2121211111111211111---11----------11111--11111111-11111111------11111--1--111-112---1---1111-11--111111111111-12-1------------------------------11111122-31111111111111121111-111112121111111111111123211-11111-111111---1111111111212111111111111-111111111121-1-------1--------2111--112111111111111111111121111211----1--------41111213443333333-433343334343433333443311---433343444443433413223333--211111111111---1----------1111---------------1111111---2111111111111121111111111111-1111111111111111111111111111111111------------1---------------------------111--11111-11 ------1-322--1---------------------------------------------------------------------------------------------1112-----------------------------------------------2---111---------1-1118111---------111---1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 83 STR:RPRED 29.3 SQ:SECSTR #################################################################EEEETTEEEEEEEETTEEEEEEEEcccTTEEcccEEEEEEHHHHHHHGGGGGGccEEEcTTccEEEEEccTTTEEEEEEEccc####################################################################################################################################### DISOP:02AL 1-1,7-7| PSIPRED cEEEEEEcHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccEEEcccEEEEEEEcccccccccccHHHHHHHHHHHHHHccccccHHHHcccccEEcccccccEEEEEEccccEEEEEEEEcccccccHHHHHHccHHHcHHHHHHHHHHHHHHccccccccEEEEEEEcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEcccccccccEEEEccccHHcccEEEc //