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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50475.1
DDBJ      :             bacterial translation initiation factor 2 (bIF-2)
Swiss-Prot:IF2_DESRM    RecName: Full=Translation initiation factor IF-2;

Homologs  Archaea  68/68 : Bacteria  912/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
a.6.1b.29.1b.43.3c.20.1c.37.1
:985 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   486->983 1zo1I PDBj e-155 56.4 %
:RPS:PDB   180->309 2casA PDBj 3e-14 1.6 %
:RPS:PDB   376->486 3cw2K PDBj 2e-05 14.6 %
:RPS:PDB   486->828 1aipA PDBj 4e-45 25.0 %
:RPS:PDB   886->983 1d1nA PDBj 2e-22 66.3 %
:RPS:SCOP  2->32 1nd9A  a.6.1.6 * 4e-04 22.6 %
:RPS:SCOP  180->305 1wd3A1  b.29.1.21 * 3e-11 6.3 %
:RPS:SCOP  411->456 1nd9A  a.6.1.6 * 2e-15 10.9 %
:RPS:SCOP  485->649 1g7rA4  c.37.1.8 * 2e-43 35.0 %
:RPS:SCOP  627->747 1n0uA1  b.43.3.1 * 8e-15 14.3 %
:RPS:SCOP  767->888 1g7rA3  c.20.1.1 * 3e-30 23.1 %
:RPS:SCOP  886->983 1d1nA  b.43.3.1 * 3e-23 66.3 %
:HMM:SCOP  486->676 1f60A3 c.37.1.8 * 5.9e-61 41.9 %
:HMM:SCOP  657->741 1g7sA1 b.43.3.1 * 7.5e-29 65.9 %
:HMM:SCOP  761->892 1g7sA3 c.20.1.1 * 1.8e-40 56.8 %
:HMM:SCOP  886->984 1d1nA_ b.43.3.1 * 1.4e-33 51.5 %
:RPS:PFM   3->51 PF04760 * IF2_N 6e-07 44.9 %
:RPS:PFM   181->305 PF03157 * Glutenin_hmw 2e-10 37.6 %
:RPS:PFM   409->457 PF04760 * IF2_N 2e-08 53.1 %
:RPS:PFM   490->644 PF00009 * GTP_EFTU 8e-20 40.6 %
:RPS:PFM   772->875 PF11987 * IF-2 4e-33 64.4 %
:HMM:PFM   489->647 PF00009 * GTP_EFTU 2.9e-46 40.3 159/189  
:HMM:PFM   769->876 PF11987 * IF-2 1.2e-44 64.8 108/109  
:HMM:PFM   1->53 PF04760 * IF2_N 8.6e-22 49.1 53/54  
:HMM:PFM   411->459 PF04760 * IF2_N 6.6e-18 42.9 49/54  
:HMM:PFM   675->737 PF03144 * GTP_EFTU_D2 1.8e-13 40.3 62/74  
:HMM:PFM   906->973 PF03144 * GTP_EFTU_D2 4.3e-06 26.9 67/74  
:BLT:SWISS 1->985 IF2_DESRM 0.0 100.0 %
:PROS 936->958|PS01176|IF2
:REPEAT 11|178->189|190->201|202->213|214->225|226->237|238->249|250->261|262->273|274->285|286->297|298->309
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50475.1 GT:GENE ABO50475.1 GT:PRODUCT bacterial translation initiation factor 2 (bIF-2) GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2146932..2149889) GB:FROM 2146932 GB:TO 2149889 GB:DIRECTION - GB:PRODUCT bacterial translation initiation factor 2 (bIF-2) GB:NOTE TIGRFAM: translation initiation factor IF-2; small GTP-binding protein PFAM: protein synthesis factor, GTP-binding; GTP-binding protein, HSR1-related; elongation factor Tu, domain 2 protein; translation initiation factor IF-2 domain protein; Miro domain protein KEGG: dsy:DSY2517 hypothetical protein GB:PROTEIN_ID ABO50475.1 GB:DB_XREF GI:134052504 InterPro:IPR000178 InterPro:IPR000795 InterPro:IPR002917 InterPro:IPR004161 InterPro:IPR005225 InterPro:IPR006847 InterPro:IPR008165 InterPro:IPR013684 LENGTH 985 SQ:AASEQ MTKKRVHELAKELNIENKELINKLMQIGISVKSHMSALENDAVEKVYHQYGKKQEKSSDSANKQIQREHGRGQGMEDKKEKDQLFRPDNAKGPGLVDRVPNRPPDRRYEDKAKVAQKPAQELRGSKTTTNSENEQTAPRQGSAQQSGQGRPQANRPQGSQGRPYGGRPQGGQSRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQGRPYGDRPQGGQSRPYGDRPQGGQGRPYGDRPQGGQSRPYGDRPQGGQGRPYGDRPQGGQGRHYGDRPQGGQGRPQGAGRPGANRGAGPSIPKPPEQVAQPKPTKAPDKTKGDRRKNYEKDGKWADGQIEKNKLFKGRNNKNKKRQHQQSAPPPILDKKPVQIAEVITVQELAEKLKKTAAEVIKKLMGLGVLATINQEVDFETATLIAGEYGIETELKVAVDKEALVMAEPEEDEDKLVLRPPVVTIMGHVDHGKTSLLDAIRETNVTAGEAGGITQHIGAYQVERNGKKITFVDTPGHAAFTSMRARGAQITDIAILVVAADDGVMPQTIEAINHAKAANVPIIVAINKMDKPDANPDKVKQELTQHELVVEDWGGDVIAVPVSAKNRTGLDNLLEMILLVAEVHELKANPDRMARGTVVEAELDKGRGPVATVLVQNGTLNVGDTIVVGQVSGRVRAMIDDKGRRVKKAPPSTPVEILGLSDVPEAGDILVAVEDEKLARDVAEKRKIRKREEGLKSSTKISLDDLFKHIQEGQIKELPIIVKADVQGSIEALAQALEKLTTEEVKVNLIHTGVGAVNETDIMLATASNAIVIGFNVRPDNNARKLADAEKVDINLYRVIYEVIDDVKKAMSGLLDPEFKEVVLGHVEVRKTFKASKIGTIAGGYVTEGKIVRDASVRVIRDGIVVFEGKLDSLKRFKDDAKEVAQGYECGLTIDRFNDVQEGDIIEAFTMEAIKREI GT:EXON 1|1-985:0| SW:ID IF2_DESRM SW:DE RecName: Full=Translation initiation factor IF-2; SW:GN Name=infB; OrderedLocusNames=Dred_1957; SW:KW Complete proteome; Cytoplasm; GTP-binding; Initiation factor;Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->985|IF2_DESRM|0.0|100.0|985/985| GO:SWS:NREP 5 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0003743|"GO:translation initiation factor activity"|Initiation factor| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 936->958|PS01176|IF2|PDOC00905| NREPEAT 1 REPEAT 11|178->189|190->201|202->213|214->225|226->237|238->249|250->261|262->273|274->285|286->297|298->309| SEG 96->107|vdrvpnrppdrr| SEG 137->153|aprqgsaqqsgqgrpqa| SEG 155->177|rpqgsqgrpyggrpqggqsrpyg| SEG 311->333|rpqggqgrpqgagrpganrgagp| BL:PDB:NREP 1 BL:PDB:REP 486->983|1zo1I|e-155|56.4|498/501| RP:PDB:NREP 4 RP:PDB:REP 180->309|2casA|3e-14|1.6|124/548| RP:PDB:REP 376->486|3cw2K|2e-05|14.6|103/128| RP:PDB:REP 486->828|1aipA|4e-45|25.0|336/373| RP:PDB:REP 886->983|1d1nA|2e-22|66.3|98/99| RP:PFM:NREP 5 RP:PFM:REP 3->51|PF04760|6e-07|44.9|48/52|IF2_N| RP:PFM:REP 181->305|PF03157|2e-10|37.6|125/622|Glutenin_hmw| RP:PFM:REP 409->457|PF04760|2e-08|53.1|49/52|IF2_N| RP:PFM:REP 490->644|PF00009|8e-20|40.6|155/183|GTP_EFTU| RP:PFM:REP 772->875|PF11987|4e-33|64.4|104/111|IF-2| HM:PFM:NREP 6 HM:PFM:REP 489->647|PF00009|2.9e-46|40.3|159/189|GTP_EFTU| HM:PFM:REP 769->876|PF11987|1.2e-44|64.8|108/109|IF-2| HM:PFM:REP 1->53|PF04760|8.6e-22|49.1|53/54|IF2_N| HM:PFM:REP 411->459|PF04760|6.6e-18|42.9|49/54|IF2_N| HM:PFM:REP 675->737|PF03144|1.8e-13|40.3|62/74|GTP_EFTU_D2| HM:PFM:REP 906->973|PF03144|4.3e-06|26.9|67/74|GTP_EFTU_D2| GO:PFM:NREP 7 GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF04760|IPR006847| GO:PFM GO:0006413|"GO:translational initiation"|PF04760|IPR006847| GO:PFM GO:0045735|"GO:nutrient reservoir activity"|PF03157|IPR001419| GO:PFM GO:0003743|"GO:translation initiation factor activity"|PF04760|IPR006847| GO:PFM GO:0006413|"GO:translational initiation"|PF04760|IPR006847| GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| RP:SCP:NREP 7 RP:SCP:REP 2->32|1nd9A|4e-04|22.6|31/49|a.6.1.6| RP:SCP:REP 180->305|1wd3A1|3e-11|6.3|126/319|b.29.1.21| RP:SCP:REP 411->456|1nd9A|2e-15|10.9|46/49|a.6.1.6| RP:SCP:REP 485->649|1g7rA4|2e-43|35.0|157/212|c.37.1.8| RP:SCP:REP 627->747|1n0uA1|8e-15|14.3|119/138|b.43.3.1| RP:SCP:REP 767->888|1g7rA3|3e-30|23.1|117/131|c.20.1.1| RP:SCP:REP 886->983|1d1nA|3e-23|66.3|98/99|b.43.3.1| HM:SCP:REP 486->676|1f60A3|5.9e-61|41.9|191/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 657->741|1g7sA1|7.5e-29|65.9|85/101|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 761->892|1g7sA3|1.8e-40|56.8|125/131|c.20.1.1|1/1|Initiation factor IF2/eIF5b, domain 3| HM:SCP:REP 886->984|1d1nA_|1.4e-33|51.5|99/99|b.43.3.1|2/2|Translation proteins|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tB9768FACH4FA67A4557 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 774 STR:RPRED 78.6 SQ:SECSTR #################################################################################################################################################################################EcEEEEEEEcccccEEEEEEcTTccEEEEEETTcccccccGGGGcTTcccTccccccTTcccccEEEEEEcccEEEEccccccccccccEEEEEccGGGcccccHHHHccEEEEcTTccEEcccEEcccccE##################################HHHHHTcccccHHHHHHHHHHHHGGHHHHHHHHHHHHTTEEEEEEEccTTccHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccTHHHHHHHHHHHHHTTccTHHHHHHHccTTccccGGHHHGEEEEEEEEcTTccHHHHHHHHHHHHccccEEEEEETTEEEEEEcccccTTEEcTTcTTccHHHHHHHHHHTTcccEEEcEEEEccGGEEETTTTEEEEEccTTcccEEEEcccGGGHHHHHHHHHHHHHHHTTTTccEEEEEccGGGTccHHHHHHHHHccccEEEEcccTTcccEEEEEEEEEETTTEEEEEEEEEEcEEEcccEEEETTTTcEEEEEccccEEEEcEEETTcEEEEEcccccccTTcEEEETTcccccccccccccEEEccEEEEEcccccccEEEcTTTcccccccEEEccccEEEEEEEEEccccccEEEEEEEEEEEccTTccEEHHHHHHHTTccTTTccccccEEEEEEEEcccTTTccHHHHHHHHHHHHHHHHHTcccEEEEEEEEEEEEEcTTTTTHHHHHHHHTTccEEEEEEETTEEEEEEEEccEEEETTTcccHHHHHHHHTTTcEEEEEEEEEEEccHHHHHHHHTTEEEEEEc DISOP:02AL 1-1,43-375,380-400,474-475,758-765,985-986| PSIPRED cccccHHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccEEEcccccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccEEEEEccccHHHHcccccccHHHHcccccEEEEEEcccccHHHHHHHHHHcccHHHHccccEEEEcEEEEcccccEEEEEccccHHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHcccccccccccccEEEEEccccccHHHHHHHHHHHHHccccccccccccEEEEEEEEEEccccEEEEEEEEEcEEccccEEEEEcccccEEEEEcccccEEEEcccccEEEEEcccccHHcccEEEEEccccHHHHHHHHHHHHccccccccccccEEHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHcccccEEEEEEEcccccccHHHHHHHHHcccEEEEEEccccHHHHHHHHHcccEEEEEHHHHHHHHHHHHHHHHccccEEEEEEEEEEEEEEEEEcccccEEEEEEEEEEEEEcccEEEEEEccEEEEEEEEHHHHHccccHHHHccccEEEEEEEccEEcccccEEEEEEEEEEEEcc //