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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50485.1
DDBJ      :             prolyl-tRNA synthetase
Swiss-Prot:SYP_DESRM    RecName: Full=Prolyl-tRNA synthetase;         EC=6.1.1.15;AltName: Full=Proline--tRNA ligase;         Short=ProRS;

Homologs  Archaea  49/68 : Bacteria  875/915 : Eukaryota  173/199 : Viruses  0/175   --->[See Alignment]
c.51.1d.104.1d.116.1
:569 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->566 2j3lB PDBj e-175 55.1 %
:RPS:PDB   8->494 1c0aA PDBj 9e-52 9.8 %
:RPS:SCOP  31->236 1evkA2  d.104.1.1 * 3e-54 18.6 %
:RPS:SCOP  256->385 1wdvA  d.116.1.1 * 7e-23 26.6 %
:RPS:SCOP  404->458 1h4qA2  d.104.1.1 * 5e-07 20.0 %
:RPS:SCOP  429->478 1serA2  d.104.1.1 * 3e-07 18.9 %
:RPS:SCOP  462->566 1g5hA1  c.51.1.1 * 5e-26 10.5 %
:HMM:SCOP  9->475 1atiA2 d.104.1.1 * 5.3e-103 43.0 %
:HMM:SCOP  460->566 1nj1A1 c.51.1.1 * 5.2e-31 44.9 %
:RPS:PFM   51->155 PF00587 * tRNA-synt_2b 7e-16 37.1 %
:RPS:PFM   258->367 PF04073 * YbaK 2e-22 44.5 %
:RPS:PFM   478->566 PF03129 * HGTP_anticodon 2e-11 37.5 %
:HMM:PFM   51->213 PF00587 * tRNA-synt_2b 1.2e-37 24.7 162/173  
:HMM:PFM   258->374 PF04073 * YbaK 2.4e-31 39.3 117/123  
:HMM:PFM   472->564 PF03129 * HGTP_anticodon 2.1e-26 39.8 93/94  
:BLT:SWISS 1->569 SYP_DESRM 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50485.1 GT:GENE ABO50485.1 GT:PRODUCT prolyl-tRNA synthetase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2161709..2163418) GB:FROM 2161709 GB:TO 2163418 GB:DIRECTION - GB:PRODUCT prolyl-tRNA synthetase GB:NOTE TIGRFAM: prolyl-tRNA synthetase PFAM: tRNA synthetase, class II (G, H, P and S); Anticodon-binding domain protein; YbaK/prolyl-tRNA synthetase associated region KEGG: chy:CHY_1775 prolyl-tRNA synthetase GB:PROTEIN_ID ABO50485.1 GB:DB_XREF GI:134052514 InterPro:IPR002314 InterPro:IPR002316 InterPro:IPR004154 InterPro:IPR004500 InterPro:IPR006195 InterPro:IPR007214 LENGTH 569 SQ:AASEQ MRVSQMLVPTLREVPAEAEVVSHQLLLRAGFIRKTASGVYTYLPLAQRVLKKLRQIIREEIDKQGGQELLMPIIQPAEMWLESGRWHVYGPELFRLKDRHDRNFCLGPTHEEVITILIRGEVRSYKQMPLLLYQIQNKYRDERRPRFGLLRGREFIMKDLYSFDRDEAGLDISYQKMHEAYTSIFSRCGVKFRPVEADSGAIGGSSTHEFMVLAESGEAAILYCSDCDYAANVEKATTLPAAGLDPAIQQLELQEVSTPGKKTAEEVAKFLGVEPFQVIKTMFYKTDKEVVAALVRGDRDVNEIKLLNVLGALTLDLADESTVQQVTGAPTGYVGPVGLENIRIVADMEVMALVNAVVGANKQDAHLINVNPKRDFQPEIVEDIRMVKAGEPCPKCGAQLLEARGIEVGQIFKLGTKYSKALGATFLDENGKEQPIVMGCYGIGVSRTMAAAIEQNYDKDGIIWPASIAPYQAIVIPVAPKDDNQMKIAEELYKALNQAGVETILDDRSERPGVKFKDADLIGYPLRIVVGNKAVTEGVVEIRQRRSGQTDLVSVKDSVPKILEILPTL GT:EXON 1|1-569:0| SW:ID SYP_DESRM SW:DE RecName: Full=Prolyl-tRNA synthetase; EC=6.1.1.15;AltName: Full=Proline--tRNA ligase; Short=ProRS; SW:GN Name=proS; OrderedLocusNames=Dred_1967; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->569|SYP_DESRM|0.0|100.0|569/569| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| BL:PDB:NREP 1 BL:PDB:REP 1->566|2j3lB|e-175|55.1|561/570| RP:PDB:NREP 1 RP:PDB:REP 8->494|1c0aA|9e-52|9.8|468/585| RP:PFM:NREP 3 RP:PFM:REP 51->155|PF00587|7e-16|37.1|105/170|tRNA-synt_2b| RP:PFM:REP 258->367|PF04073|2e-22|44.5|110/122|YbaK| RP:PFM:REP 478->566|PF03129|2e-11|37.5|88/91|HGTP_anticodon| HM:PFM:NREP 3 HM:PFM:REP 51->213|PF00587|1.2e-37|24.7|162/173|tRNA-synt_2b| HM:PFM:REP 258->374|PF04073|2.4e-31|39.3|117/123|YbaK| HM:PFM:REP 472->564|PF03129|2.1e-26|39.8|93/94|HGTP_anticodon| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 5 RP:SCP:REP 31->236|1evkA2|3e-54|18.6|204/291|d.104.1.1| RP:SCP:REP 256->385|1wdvA|7e-23|26.6|128/150|d.116.1.1| RP:SCP:REP 404->458|1h4qA2|5e-07|20.0|54/264|d.104.1.1| RP:SCP:REP 429->478|1serA2|3e-07|18.9|50/311|d.104.1.1| RP:SCP:REP 462->566|1g5hA1|5e-26|10.5|105/127|c.51.1.1| HM:SCP:REP 9->475|1atiA2|5.3e-103|43.0|300/394|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 460->566|1nj1A1|5.2e-31|44.9|107/127|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1341 OP:NHOMOORG 1097 OP:PATTERN 11111111--------11211211111111112211-111111111-11111121-----1----211 1131211111111111111-11--11111111111111211-1111111111111111112111111111111111111111-12222111111111112111121111111111111111111-121-112221122222111221111111111111111111111111111111111111112211111222221233223323231111213231112111111111321111111111111111111111111111111111111111111222111111111111111111111111111111111111111111112212222222222222211211122221112111111112212222111111-11111111111121111111111111111111111111111111211111111111111111111111111111111111111111-111111111111111211111111111111111-1-1111111111111111111211111111111111111111111111111111111111111111111111111---1111111111112121121111121-121111111111111111111111111112211111112111111111111111111111-1111111111111112111111111111-11111111111111111111111122211111111111111112111111111111111111111111211111111112111111212121211111111111122111111111111111111111111111111111111111111111111111111111122111111111--1--1-111111---11------1------1---2212211111111 22--322-2---1113233111122212212112222312222333112222221222222221122112222122112112223211-1-121111111112112-1-31-21111111111122111121-111-1--11111----21--1-111211113122111-12-41122H221111245311-13211- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 567 STR:RPRED 99.6 SQ:SECSTR TTTccccEEEEEccccccccTTccccHHHHHHTHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHTTcEEccccccccccccEHHTGGGTcccccEEEccccTTcEEEcccccHHHHGTTTTcHHHHHTTccEEEEEEEEEcccccccccTTcccEEEEEEEEEEcccHHHHHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHccccccTTccccEEEcHHHHTTcccHHHHHHHHcTTEEEEEEEETTGGHHHHHHHHHHHHHTTcccccEEEEccGGGGGGGEEcTTGGGccHHHHHHHHHHTTccTTcEEEEEEEEHHHHHHHHHHHHHHHHHHTTccccccccEEEEEccccEEEcccccEEEcccTTccHcccccHHHHHHccTTccccEEEEETETTEEEEEEEEccccHHHHHHHHHHHHHTTTTcccEEEEEEEHHHHHHHHHTcccGGGGccccccTTcccTTTTccccccHHHHHTTcccccHHHHHHGGGEEEEEcTTTccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHEEEEETTHHHHHHHHHHH## PSIPRED cccHHHHHHHHccccHHcccHHHHHHHHHHcHHHccccEEEEccHHHHHHHHHHHHHHHHHHHcccEEEccccEEcHHHHHHcccccccccccEEEEcccccEEEEccccHHHHHHHHHHccccHHHHHHHHHHcccEEccccccccccEEEcEEEEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHcccccEEEEEEccccHHHHHHHHHcccccccccccccccEEEEEccccccHHHHHHHccccHHHEEEEEEEEEccEEEEEEEcccccccHHHHHHcccccccccccHHHHHHHHcccccEEcccccccccEEEEccccccccEEEEcccccccEEEccHHcccccccEEEEEEcccccccccccEEEEcccEEEEEEEEEEccccccccccEEEcccccEEEEEEccccccHHHHHHHHHHHHccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEEcccHHHccEEEEEEcccccEEEEEHHHHHHHHHHHHHcc //