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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50526.1
DDBJ      :             domain of unknown function DUF1727
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  206/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.72.2
:466 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   2->435 1e8cA PDBj 2e-20 11.8 %
:RPS:SCOP  69->309 1j6uA3  c.72.2.1 * 6e-14 17.3 %
:HMM:SCOP  50->310 1gg4A4 c.72.2.1 * 2.4e-36 33.5 %
:RPS:PFM   68->287 PF08245 * Mur_ligase_M 4e-05 30.2 %
:RPS:PFM   329->441 PF08353 * DUF1727 4e-26 49.5 %
:HMM:PFM   329->441 PF08353 * DUF1727 9.2e-38 46.8 111/113  
:HMM:PFM   56->290 PF08245 * Mur_ligase_M 3.9e-22 27.5 178/188  
:BLT:SWISS 245->366 MURE2_CLOAB 6e-09 27.0 %
:PROS 54->77|PS01011|FOLYLPOLYGLU_SYNT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50526.1 GT:GENE ABO50526.1 GT:PRODUCT domain of unknown function DUF1727 GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2209215..2210615) GB:FROM 2209215 GB:TO 2210615 GB:DIRECTION - GB:PRODUCT domain of unknown function DUF1727 GB:NOTE PFAM: Mur ligase, middle domain protein; domain of unknown function DUF1727 KEGG: swo:Swol_0966 hypothetical protein GB:PROTEIN_ID ABO50526.1 GB:DB_XREF GI:134052555 InterPro:IPR001645 InterPro:IPR013221 InterPro:IPR013564 LENGTH 466 SQ:AASEQ MNIRLVMAVLAAKFAGFVSRKLGWKGSSLPGVVARKIYKDTLGDLAGQARKGVIMVTGTNGKTTTNNMIANVIQNGGYKVVLNQEGANLITGVTAAFIKYADWLGRVDCDYALLEVDEASFPKVVKEVKPQIVVVNNFFRDQLDRYGELDTTVKMVKEALKSLLDVQLVLNTDDPLVAQMKEATGHNASFFGLAPNQRTGNGAKQTRESRFCPHCGNELYYLSFQYSQLGSYACAQCGFKREDPEIEASDVINQGIALQCRIRYPGGETKLAIHTQGFYNLYNALAAFTVGYLVGIDNEQILQGLLKYKPAIGRMETFNYKGKSAILNLVKNPTGYNEGITTLMSLHGSKNVFMAVNDNDADGRDISWLWDVDFEHLAQGHQSIETFTCSGLRGEEMALRLKYAGVPVEKITVIQEMDAAILKALEDPGESIYLFSTYTALWPAQRILLGLAEKEELNVKGLSSIS GT:EXON 1|1-466:0| BL:SWS:NREP 1 BL:SWS:REP 245->366|MURE2_CLOAB|6e-09|27.0|122/483| PROS 54->77|PS01011|FOLYLPOLYGLU_SYNT_1|PDOC00773| TM:NTM 2 TM:REGION 1->19| TM:REGION 87->109| SEG 57->67|tgtngktttnn| SEG 123->135|kvvkevkpqivvv| RP:PDB:NREP 1 RP:PDB:REP 2->435|1e8cA|2e-20|11.8|363/482| RP:PFM:NREP 2 RP:PFM:REP 68->287|PF08245|4e-05|30.2|169/187|Mur_ligase_M| RP:PFM:REP 329->441|PF08353|4e-26|49.5|111/111|DUF1727| HM:PFM:NREP 2 HM:PFM:REP 329->441|PF08353|9.2e-38|46.8|111/113|DUF1727| HM:PFM:REP 56->290|PF08245|3.9e-22|27.5|178/188|Mur_ligase_M| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF08245|IPR013221| GO:PFM GO:0009058|"GO:biosynthetic process"|PF08245|IPR013221| RP:SCP:NREP 1 RP:SCP:REP 69->309|1j6uA3|6e-14|17.3|173/207|c.72.2.1| HM:SCP:REP 50->310|1gg4A4|2.4e-36|33.5|209/214|c.72.2.1|1/1|MurD-like peptide ligases, catalytic domain| OP:NHOMO 211 OP:NHOMOORG 210 OP:PATTERN --------------------------------111------------------2-------------- ------1111111111-11-11111-11111111111111--11-----11-1111----11-11-1111111111111-111-----------------------------------------------------11111---11-11-111----------11--111------------------11-1-----------------------------------------11111111111111111111111111111111111111111111111111-1111111111111111111111111111111111111111--1111111111111-111111-111-1--11111111--111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 459 STR:RPRED 98.5 SQ:SECSTR #THHHHHHHHHHHHTTcGGGccEEEEEE##ccccHHHHHHHHHHHHHHTTccEEEEEcccccccHHETTEEEETTcccccccccccccccccHHHHHHHHHHHcTHHTTccEEEEccHHHHHTTTTTTccccEEEcccccccHHHHccHHHHHHHHHHHTccGGccEEEEETTcHHHHHHHTTcTTcEEEEccEccccccccHHHHHHHHHGGGTTccEEEEETTcGGGccGGGccccTTTccEEEEEEEEEEccccEEEEEEETTccEcEEEEcccHHHHHHHHHHHHHHHHTTccHHHHHHHGGGccccTTcEEEccTTccEEEEEccccHHHHHHHHHHHHHTccccEEcEEEccccccccTHHHHHHHHHHHccccEEEEccccccTccHHHHHHHHHTTcEEcGGGcEEccHHHHHHHHHHccTTcEEEEccccccccccccHHHHHHHHHHHHHHH#### DISOP:02AL 1-1,464-467| PSIPRED ccHHHHHHHHcccEEEEcccHHccccccccEEEEEHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHccccEEEEccccccccccHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHcccEEEEEccccHHHHHHcccHHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEEccHHHcccccccccccccccccccccEEEccccccccccccccccccccccccEEEEEEEEcccEEEEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccEEEEEEcccEEEEEccccHHHHHHHHHHHHHcccccEEEEEEccccccccccHHHHcccHHHHHHHHccccEEEEccccHHHHHHHHHHcccccccEEEEccHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHcHHHHHHHHccccccc //