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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50535.1
DDBJ      :             tryptophanase
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  114/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:462 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->461 1ax4A PDBj e-166 61.5 %
:RPS:PDB   6->461 2c44B PDBj 5e-44 54.3 %
:RPS:SCOP  8->461 1ax4A  c.67.1.2 * e-161 60.8 %
:HMM:SCOP  4->461 1ax4A_ c.67.1.2 * 7.1e-146 39.7 %
:RPS:PFM   49->352 PF01212 * Beta_elim_lyase 1e-13 28.1 %
:HMM:PFM   49->427 PF01212 * Beta_elim_lyase 2.6e-97 44.4 284/290  
:BLT:SWISS 9->461 TNAA_DESVV 0.0 68.7 %
:PROS 251->269|PS00853|BETA_ELIM_LYASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50535.1 GT:GENE ABO50535.1 GT:PRODUCT tryptophanase GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2216451..2217839) GB:FROM 2216451 GB:TO 2217839 GB:DIRECTION - GB:PRODUCT tryptophanase GB:NOTE PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase KEGG: cno:NT01CX_2071 tryptophanase (L-tryptophan indole-lyase) (TNase) GB:PROTEIN_ID ABO50535.1 GB:DB_XREF GI:134052564 InterPro:IPR001597 InterPro:IPR011166 LENGTH 462 SQ:AASEQ MTKVQPKAEPFRIKMVEPIKMISKEERQSALERAGYNLFLLNSDEVYIDLLTDSGTGAMSDNQWAGLMLGDEAYSGSRNFHNLKNAVKDIFDYNFTIPTHQGRGAEQVLFPVIIKKPGDLFISNMHFDTTKGHVEMAGGRAINMVIEDAYDTEKFHPFKGNFDLNKLEATIKEKGAENIACVIITVTCNSSGGQPVSMENIRQTSDLAKRHGIRVFIDAARSYENAYFIKSREEGYAAKSIPEIVKEMYSYADGFTMSAKKDAIVNIGGILAIKDDEDLFNKCAARTVPMEGFITYGGLAGRDMEALARGLYEGMDYDYLDYRIGQVAYLGERLREGGVPIQFPTGGHAVFVDAKKILPHIPYYQFPAQSLANELYLDTGVRSVEIGSFLLGRDPDTGENLESPMELLRLTIPRRTYTYNHMDIIAEGLISVSKKANALKGLEFTYEPPILRHFTAKLKPVQ GT:EXON 1|1-462:0| BL:SWS:NREP 1 BL:SWS:REP 9->461|TNAA_DESVV|0.0|68.7|453/462| PROS 251->269|PS00853|BETA_ELIM_LYASE|PDOC00667| BL:PDB:NREP 1 BL:PDB:REP 9->461|1ax4A|e-166|61.5|452/464| RP:PDB:NREP 1 RP:PDB:REP 6->461|2c44B|5e-44|54.3|455/467| RP:PFM:NREP 1 RP:PFM:REP 49->352|PF01212|1e-13|28.1|274/285|Beta_elim_lyase| HM:PFM:NREP 1 HM:PFM:REP 49->427|PF01212|2.6e-97|44.4|284/290|Beta_elim_lyase| GO:PFM:NREP 2 GO:PFM GO:0006520|"GO:cellular amino acid metabolic process"|PF01212|IPR001597| GO:PFM GO:0016829|"GO:lyase activity"|PF01212|IPR001597| RP:SCP:NREP 1 RP:SCP:REP 8->461|1ax4A|e-161|60.8|454/465|c.67.1.2| HM:SCP:REP 4->461|1ax4A_|7.1e-146|39.7|458/465|c.67.1.2|1/1|PLP-dependent transferases| OP:NHOMO 146 OP:NHOMOORG 127 OP:PATTERN 11----------------------111----------------------------------------- -11-----------------------------------------------------------11-11-----------------------1---11---1--------1---------------------------11111----------------------------1--------------------1-------------------------------------------------------------------------------------------------------------------------------------1-----------------1----2---3----33-1--12----1-12---------------------11111---------------------------------1-----1-----1----------------------------------------------------------------------11----2222----------------------1---------1-----------1-------------11-------------1---1----------------------------11--------------------------1---1----------2-11---1111111111-1111111111111111111------1-------------------1-111---1---------------------------------1--1----112------------------------------------------31111111111-----------------1--------------2-----------------------------1--------11 ----21-------------------------------------------1-11--------------------------------------------------------1---------------------------------------------------------------1------------------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 457 STR:RPRED 98.9 SQ:SECSTR ####cccccccccccccccccccHHHHHHHHHHTTTcGGGccGGGccEEccccTTcccccHHHHHHTTcccccccccHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHcccTTTcEEEEccccHHHHHHHHHTTcEEEEcccTTTTcTTcccTTTTcccHHHHHHHHHHHcGGGcccEEEEcccTTTTcccccHHHHHHHHHHHHHHTccEEEEcTTHHHHHHHHHHHcGGGTTccHHHHHHHHGGGccEEEEETTcTTcccccEEEEEccGHHHHHHHHHHHHHHTccTTTTTccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHTTccccccccccEEEEEHHHHcTTccGGGcHHHHHHHHHHHHHcEEcEEEcHHHHcccTTTcccccccccEEEEEccTTTccHHHHHHHHHHHHHHHHTGGGcccEEEEEcccccGGGTcEEEEc# DISOP:02AL 1-3,462-463| PSIPRED ccccccccccEEEEEEEccccccHHHHHHHHHHccccEEccccccEEEEEccccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHcccccEEEEccccHHHHHHHHHHcccEEEEEEccccccccccccccccccHHHHHHHHHHccccccEEEEEEEcccccccEEccHHHHHHHHHHHHHHccEEEEEHHHHHHHHHHHHccccccccccHHHHHHHHHccccEEEEEccccccccccEEEEEcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccEEEEEHHHHcccccHHHcHHHHHHHHHHHHHccEEEccHHHHHcccccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEEEEEEEcc //