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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50587.1
DDBJ      :             3-oxoacyl-[acyl-carrier-protein] synthase II
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  867/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:413 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->411 2gqdA PDBj e-147 60.1 %
:RPS:PDB   3->411 1e5mA PDBj e-109 60.1 %
:RPS:SCOP  3->253 1dd8A1  c.95.1.1 * 2e-85 38.6 %
:RPS:SCOP  253->410 1b3nA2  c.95.1.1 * 9e-46 59.5 %
:HMM:SCOP  2->251 1e5mA1 c.95.1.1 * 3.2e-84 45.6 %
:HMM:SCOP  213->411 1tqyA2 c.95.1.1 * 1.2e-75 49.2 %
:RPS:PFM   4->246 PF00109 * ketoacyl-synt 1e-34 39.5 %
:RPS:PFM   274->369 PF02801 * Ketoacyl-synt_C 4e-18 45.8 %
:HMM:PFM   3->246 PF00109 * ketoacyl-synt 1.1e-70 35.6 233/253  
:HMM:PFM   254->369 PF02801 * Ketoacyl-synt_C 1.7e-42 45.7 116/119  
:BLT:SWISS 3->411 FABF_BACSU e-146 61.3 %
:PROS 154->170|PS00606|B_KETOACYL_SYNTHASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50587.1 GT:GENE ABO50587.1 GT:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase II GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION complement(2268050..2269291) GB:FROM 2268050 GB:TO 2269291 GB:DIRECTION - GB:PRODUCT 3-oxoacyl-[acyl-carrier-protein] synthase II GB:NOTE PFAM: beta-ketoacyl synthase KEGG: mta:Moth_0950 beta-ketoacyl synthase GB:PROTEIN_ID ABO50587.1 GB:DB_XREF GI:134052616 InterPro:IPR000794 LENGTH 413 SQ:AASEQ MSKRVVVTGLGVISPVGTGLDKFWTALTSGVSGIARITRFDPSEYSTQIAGEVKDFDYSKYLDKKEARRMDKFSQYAVVSAAMAIEDAGLDLEALDKDHTGVIVGSGIGGMETFEEQCKVLVNRGPNRISPFLIPMMIANMAAGQIAIKFGLRGPNITTITACASSGNAIGDAFKLIQRGNAEVVITGGTEAPITPLAVAGFCAAKAMTTNNDEPEQASRPFDANRDGFVMGEGAAMLVLETLEHAQKRGAHIYAEIVGYGSTCDAYHITAPDPEGYGASSAMRMALEDAGLKPEDVQYINAHGTSTPVGDVAEVGAIKKVFGEHAYKLVVSSTKSMTGHMLGAAGAIEGMASILTIKNSMVPPTINYENPDPDCDLDFVPNEAREMNVDVALSNSFGFGGHNVTLAFKKFNF GT:EXON 1|1-413:0| BL:SWS:NREP 1 BL:SWS:REP 3->411|FABF_BACSU|e-146|61.3|408/413| PROS 154->170|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| BL:PDB:NREP 1 BL:PDB:REP 2->411|2gqdA|e-147|60.1|409/411| RP:PDB:NREP 1 RP:PDB:REP 3->411|1e5mA|e-109|60.1|409/411| RP:PFM:NREP 2 RP:PFM:REP 4->246|PF00109|1e-34|39.5|233/245|ketoacyl-synt| RP:PFM:REP 274->369|PF02801|4e-18|45.8|96/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 3->246|PF00109|1.1e-70|35.6|233/253|ketoacyl-synt| HM:PFM:REP 254->369|PF02801|1.7e-42|45.7|116/119|Ketoacyl-synt_C| RP:SCP:NREP 2 RP:SCP:REP 3->253|1dd8A1|2e-85|38.6|249/253|c.95.1.1| RP:SCP:REP 253->410|1b3nA2|9e-46|59.5|158/161|c.95.1.1| HM:SCP:REP 2->251|1e5mA1|3.2e-84|45.6|250/250|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 213->411|1tqyA2|1.2e-75|49.2|199/205|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 4339 OP:NHOMOORG 1053 OP:PATTERN -------------------------------------------------------------------- 2371L2333331-1EDDJJ-JDCCT9JIJJJEFDCD74572QFO1111121123211411NK21U6SaHV31111111-1112111111114111111-258553K66241111111111111111111211111122255111J346456691111222211322EDCW51111111111111111111121N1111111121111111211471121114111111111A3111111111111111111112-111111-1-11111111111111122211111241111111111111111111111111111111111111431111111111M1551111112--1211211311111111111111318222233333754443355633444444444444-4465655557426668556666555953253433333441111111113322213111111111111111111111111111111211112221553342GE99B83345FFFE2J564222312568123324336742332223412222221223225143251243142221353633C563313aN331321111111111111111111111334432275335466666566666666666661-22221111111B293243255A288322-522222323353522222433483BA422222222222222225223222221747567656565112435333766743B5611113111111133111441132214A44358D66352622879411111111234481222224654443333333322222212--1111--------1-1-------------------------11111111111A2 1152fr3-311-1128DK8UGIMUiWW222454LM86BBC99B344LIENIGEEB9TPG878122112-1111212112111111121-254D112----1-4111-193N44243-2221222412215A2-2231111222411212-31142422122229718547A54872448*7378H845AL473352226 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 412 STR:RPRED 99.8 SQ:SECSTR ccccEEEEEEEEEcTTcccHHHHHHHHHTTcccEEEccccccTTccccEEEccccccGGGTccHHHHHTccHHHHHHHHHHHHHHHHHTccccTTTGGGEEEEEEcccccHHHHHHHHHHHHHHcGGGccTTHHHHHcTTHHHHHHHHHHTccccEEccccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEccccHHHHHHHHHTTcccccTTcGGGTccTTcTTccccccccEEEEEEEEEHHHHHHTTccccEEEEEEEEEEcccccccccTTcHHHHHHHHHHHHHHTccGGGccEEEccccccHHHHHHHHHHHHHHHGGGGGGcEEEcTHHHHcccGGGHHHHHHHHHHHHHHHTEEcccTTcccccTTccccccccccEEccccEEEEEEEETTTEEEEEEEEccc# DISOP:02AL 1-1| PSIPRED ccccEEEEEEEEEEcccccHHHHHHHHHcccccccccccccccccccccccccccccHHHcccHHHHHHccHHHHHHHHHHHHHHHHccccHHHcccccEEEEEEcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHccccccccccccccccccccccccEEEEEEEEEEEEEcHHHHHHcccEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHccccHHHccEEEccccccccccHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccEEEEEccccccEEEEEEEEEccc //