[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50633.1
DDBJ      :             type II secretion system protein E
Swiss-Prot:             

Homologs  Archaea  64/68 : Bacteria  416/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:457 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   107->367 2gzaA PDBj 7e-28 34.4 %
:RPS:PDB   254->416 1dmaB PDBj 1e-31 14.5 %
:RPS:SCOP  106->384 1p9rA  c.37.1.11 * 1e-29 23.4 %
:HMM:SCOP  78->392 1g6oA_ c.37.1.11 * 8.2e-75 29.4 %
:RPS:PFM   114->383 PF00437 * GSPII_E 3e-25 38.3 %
:HMM:PFM   98->382 PF00437 * GSPII_E 6.3e-85 41.2 274/282  
:BLT:SWISS 20->335 Y781_METJA 6e-46 40.9 %
:PROS 237->243|PS00227|TUBULIN
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50633.1 GT:GENE ABO50633.1 GT:PRODUCT type II secretion system protein E GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2312272..2313645 GB:FROM 2312272 GB:TO 2313645 GB:DIRECTION + GB:PRODUCT type II secretion system protein E GB:NOTE PFAM: type II secretion system protein E KEGG: art:Arth_2925 type II secretion system protein E GB:PROTEIN_ID ABO50633.1 GB:DB_XREF GI:134052662 InterPro:IPR000217 InterPro:IPR001482 LENGTH 457 SQ:AASEQ MSLLQRLEKQKSLQPDHTQQVEIALARRDRRLQGKAPLQELTLTLHKKVIDKLKDIPEDVKDHPETLAKKIETLVNDLLDEGEENVARPQRQMIVAEIIDETIGFGPITTLLNDPSISEVMVNGPDQIYVERDGKLILTGVNFRDNAHVLHIIDKIVAPIGRRIDESMPMVDARLPDGSRVNAIIPPLALNGPTITIRKFSKDPYTVDDLINFGTLTPQMAQFVEACVKARLNIVVSGGTGSGKTTTLNVLSSFIPPDERIVTIEDAAELQLRQEHVITLESRPPNIEGKGAITIRDLVRNSLRMRPERIVVGEVRSGEALDMLQAMNTGHDGSLTTGHANTPRDMLSRLETMVLMAGMDLPIRAIREQISSAIDLIIQQSRLKDGSRKITHITEVQGMEGEVIILQDLFVFHQTGLDENGKVKGTFHSTGIRPKFTSQLETIGIKLPPGLFSPSLF GT:EXON 1|1-457:0| BL:SWS:NREP 1 BL:SWS:REP 20->335|Y781_METJA|6e-46|40.9|308/721| PROS 237->243|PS00227|TUBULIN|PDOC00199| SEG 237->247|sggtgsgkttt| BL:PDB:NREP 1 BL:PDB:REP 107->367|2gzaA|7e-28|34.4|253/324| RP:PDB:NREP 1 RP:PDB:REP 254->416|1dmaB|1e-31|14.5|152/189| RP:PFM:NREP 1 RP:PFM:REP 114->383|PF00437|3e-25|38.3|253/273|GSPII_E| HM:PFM:NREP 1 HM:PFM:REP 98->382|PF00437|6.3e-85|41.2|274/282|GSPII_E| GO:PFM:NREP 3 GO:PFM GO:0005524|"GO:ATP binding"|PF00437|IPR001482| GO:PFM GO:0005622|"GO:intracellular"|PF00437|IPR001482| GO:PFM GO:0006810|"GO:transport"|PF00437|IPR001482| RP:SCP:NREP 1 RP:SCP:REP 106->384|1p9rA|1e-29|23.4|256/378|c.37.1.11| HM:SCP:REP 78->392|1g6oA_|8.2e-75|29.4|309/323|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 1007 OP:NHOMOORG 482 OP:PATTERN 332123434444443323222224433524651113322222562224-663512222222-22-21- 4-42611111111111111-11--111111111111122222444222223-454224222262111342211111111141-------------------------------------------11---1121-243455---21--------------------------------------------15---2-22-1--111-1-----1-1---------------22------------------------------------------------------------------------------------------1-11------2--2-3-11----1-2--2231-3-251--1-21212--1--36225-4223-13173154311211111111114-111113227651444673554553172213121211221--------264--1-111111111111111111111111111111-2354-133154333351-22233633333333452345--55311122333233-11-111----------212--3---21-1-11111-2-2----1121112111----1--2--11-2232314-1---2311-----1---1--1---11---1-11-12----1-1------11-2--2-----------1-----1-----1-------1121--1-----1---1--------1-------111221111211--2------1112-1-11111-111-------1----------1-12211111----1-121---------11323-----423333221111---1--1----------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 364 STR:RPRED 79.6 SQ:SECSTR ###############################################TTccGGGcTTccHHHHTHHHHHHHHHHHHHTTccccHHHHHH#####HHHHHHHHTccGGGHHHHccTTEEEEEEccTTEEEEEETTEEEEEEcTTccHHHHHHHHHHHHHHTTccccccccEEEEEcTTccEEEEEcTTTccTTcEEEEEccccccccHHHHHHTTcccHcHHHHHHHHHHTTccEEEEEcccccHHHHHHHHHTccccccccccTTcccTccHHTcccEccHHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHccccccccTTcTTcEEcccHHHHTTccccccEEEEEEEEEHHHHTTcGGGEEEccccTTcHHHHHHHHHHccccccEEEEccccccccEEEEcHHHHTTcEEE######################################### DISOP:02AL 1-9,63-64,68-68| PSIPRED ccHHHHHcccccccccccccccEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHccccccEEEEEccccEEEEEcccEEEEccEEccHHHHHHHHHHHHHHHcccccccccEEEEEEccccEEEEEEccccccccEEEEEEcccccccHHHHHHcccccHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHcccccEEEEEEcccccccccccEEEEEEEEccccccccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHcccccccccHHHHHHHHHHHEEEEEEEEEccccccEEEEEEEEEcccccEEEEEEEEEHHHHHccccccEEEEEEEccccHHHHHHHHHHcccccHHHHccccc //