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Desulfotomaculum reducens MI-1 (dred0)
Gene : ABO50637.1
DDBJ      :             putative methyl-accepting chemotaxis sensory transducer
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  24/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.274.1d.110.6h.4.5
:360 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   65->179 3by8A PDBj 2e-05 9.8 %
:RPS:PDB   209->354 1a87A PDBj 4e-10 10.1 %
:RPS:SCOP  65->179 3by8A1  d.110.6.1 * 7e-06 9.8 %
:RPS:SCOP  209->257 2aswA1  a.274.1.1 * 5e-09 32.7 %
:HMM:SCOP  46->181 1ojgA_ d.110.6.1 * 7e-06 17.3 %
:HMM:SCOP  225->352 2ch7B1 h.4.5.1 * 3.2e-06 26.1 %
:RPS:PFM   209->252 PF00672 * HAMP 6e-10 50.0 %
:HMM:PFM   187->252 PF00672 * HAMP 3.8e-18 37.9 66/70  
:BLT:SWISS 70->135 INO80_CANAL 5e-04 36.9 %
:BLT:SWISS 209->338 MCPB_BACSU 3e-10 27.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID ABO50637.1 GT:GENE ABO50637.1 GT:PRODUCT putative methyl-accepting chemotaxis sensory transducer GT:DATABASE GIB00494CH01 GT:ORG dred0 GB:ACCESSION GIB00494CH01 GB:LOCATION 2315958..2317040 GB:FROM 2315958 GB:TO 2317040 GB:DIRECTION + GB:PRODUCT putative methyl-accepting chemotaxis sensory transducer GB:NOTE PFAM: histidine kinase, HAMP region domain protein KEGG: ljo:LJ0066 two-component regulatory system histidine kinase GB:PROTEIN_ID ABO50637.1 GB:DB_XREF GI:134052666 InterPro:IPR003660 LENGTH 360 SQ:AASEQ MFHKKKSFQRKKVGRFSLGFKLSLSITLLVMLLMICIGINSYLRNRTILLQEAQSRGWMTARTTSAFAADYLRGYNPNLQSNIIDHLERDPFIKRVAILDINGVVLKSSDESMVQKKMTGQEVQEALIQKKDTLKYISDIKGHPLTMEFISPVAARNEAPLGYFWIEADLTYISAHLINTARNQIITSLLAILAGLILSRLIIIRVIQRPIKELVQATDRVSTGDFSGRVHVYNQDELGKLANAFNTMTDHLGVLFQSIRTAVNDINHTTMLIINRSEQSDLATRKLTDSLNQLQQTAAQLPNAAQNDIPLECSNKLHESTETTLRQQEHLKEIRSASRKLIRYVDRLDSISLQFKFNEK GT:EXON 1|1-360:0| BL:SWS:NREP 2 BL:SWS:REP 70->135|INO80_CANAL|5e-04|36.9|65/1387| BL:SWS:REP 209->338|MCPB_BACSU|3e-10|27.2|125/662| TM:NTM 2 TM:REGION 19->41| TM:REGION 185->207| SEG 22->35|lslsitllvmllmi| SEG 185->207|iitsllailaglilsrliiirvi| RP:PDB:NREP 2 RP:PDB:REP 65->179|3by8A|2e-05|9.8|112/133| RP:PDB:REP 209->354|1a87A|4e-10|10.1|139/297| RP:PFM:NREP 1 RP:PFM:REP 209->252|PF00672|6e-10|50.0|44/69|HAMP| HM:PFM:NREP 1 HM:PFM:REP 187->252|PF00672|3.8e-18|37.9|66/70|HAMP| GO:PFM:NREP 3 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| RP:SCP:NREP 2 RP:SCP:REP 65->179|3by8A1|7e-06|9.8|112/133|d.110.6.1| RP:SCP:REP 209->257|2aswA1|5e-09|32.7|49/54|a.274.1.1| HM:SCP:REP 46->181|1ojgA_|7e-06|17.3|133/0|d.110.6.1|1/1|Sensory domain-like| HM:SCP:REP 225->352|2ch7B1|3.2e-06|26.1|119/0|h.4.5.1|1/1|Methyl-accepting chemotaxis protein (MCP) signaling domain| OP:NHOMO 26 OP:NHOMOORG 24 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111--111-111---11---2-----1---------1-------------------------------1111---------------------------------------------------------1---------------------------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 258 STR:RPRED 71.7 SQ:SECSTR ################################################################HHHHHHTTccGGGccHHHHHHHHHHHTTccEEEEEETTccccccccGGGTTcccccGGGTGGGGTccEE##EEEcccccc#EEEEEEEEEcTTccEEEEEEEEEEHHHHHHHHHc#############################GGTTTccEEEEEEETTEEEEEEEccTTcEEEEEEGGGcGGGcEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHTccGGGcccHHHHHHHHHHHHHHHTcTTccccHHHHHHHH###### DISOP:02AL 1-9,112-125,264-344,360-361| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccEEEEEEEccccEEEEcccHHHcccccccHHHHHHHHccccEEEEEEEEccccEEEEEEEEEccccccEEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //